Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023709.1 Length=51308 Score E Sequences producing significant alignments: (Bits) Value seq4597 141 3e-29 >seq4597 Length=157418 Score = 141 bits (156), Expect = 3e-29 Identities = 586/905 (65%), Gaps = 62/905 (7%) Strand=Plus/Plus Query 34522 CGTCGACCTCGACCGAGATGTTCGTCGTCCAGTGCTTC--CCGGTCTCCGACTTGCAGTT 34579 |||| |||||||| ||||||||||| |||||||| | || ||| | ||||||||| Sbjct 124420 CGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGC--CTTGCAGTT 124477 Query 34580 GATGAAGCGGAAGATGTCCTCGTCTTCCCAGTGCATCATCGACATGCGAGCCGACCGGCG 34639 ||||||| ||||| ||| ||| |||||| |||||| | ||| || || ||||| || Sbjct 124478 GATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACG 124537 Query 34640 AACACCGCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCCTTCAACCC 34699 |||| || || || || | ||||||| |||||||||||| ||| |||| | || Sbjct 124538 TGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCC 124597 Query 34700 GTGAAGGTGGCTCTCGTCGTGTGCAGTCTCCGAGAGGATTTCGCACACGTCGATCAGCAT 34759 | ||||| | | || ||| || |||| | || | | || || Sbjct 124598 GGTCAGGTGAC---GGCCGGTTGC---CTTGTTGAGGGTGTCTGTGATGCTGA----CAA 124647 Query 34760 CCGA----GCCAGTGGCTGTGGGCCTGACGCCTTGCCCCCGAACGTCTTCAGCTTGGCAC 34815 ||| |||| || |||||| || || | || ||||| ||||||| | || || Sbjct 124648 TCGATGTCGCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAAC--GGTAC 124705 Query 34816 CGAACGGCCGC--ACCCGAGACACGTCGTAGACGCGCTGGAAGTGGCTGACCTCGTCGCG 34873 | || | || |||| |||| ||||| | ||| || |||| | || Sbjct 124706 GCCGTGTCCTCTGACATCGGACAGGTCGAAGACG---AGTCCGTGCATGCCCTCTT--CG 124760 Query 34874 GTAGTGGGTGTCGATCAGGTCGACCAGGGCTGCCGCCCACCCTTCCCGCGAGTCCTCGAT 34933 || | ||||| |||||||| | | ||||| |||| || | || | |||||| | Sbjct 124761 GTCG-ACGTGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCAC 124819 Query 34934 GAC--GAACGCACCGGCCCAGTCCGGGTCGTACTCCGTCGACAGGACCCCGGC---CTCC 34988 ||| || || | | | ||||| | | ||| | ||||| || || |||| Sbjct 124820 GACATGAGTGCGGCAG--CTTTCCGGCGCCTTGTCCATGAACAGGCTGCCTGCCTGCTCC 124877 Query 34989 TTCATCGCCTCGTAGTCCGGGTG-GTCCCGGTCGCAGACGATGTGGACGTACAGCTCCTG 35047 || | || ||||||||||||| | | ||| || | || | ||| |||| | Sbjct 124878 TTGGTTGCTGCGTAGTCCGGGTGAGACTCGG-CGATGGTGACGCCCACGAACAG-----G 124931 Query 35048 TTGCACAGGGCCG--TAGTTGGTGAAGTACCGGTTC---GAGTAGTTCGCACCGACTCCA 35102 ||| |||| || | ||| | | ||| | |||||||| || ||||| || Sbjct 124932 CTGCCCAGGATCGGCTGAGTGGCCTTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCG 124991 Query 35103 CCGCCCTCCATGAGGCGCATGAACG---TGAACTCGAAGTGGTCCGAGGGCTTCTCGGTC 35159 |||||||| | || || | ||| ||||| ||||||||| || ||| | | | Sbjct 124992 CCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGAC 125048 Query 35160 CACCCGCTCACCCAGCAGTTGAAGAGGTGCTGGGCGTTCTTCACG---CCGGATGCCCAC 35216 || ||| || | |||||| ||| ||| |||||| |||| ||||| Sbjct 125049 CATCCGGAGACGAAACAGTTG-CGAGAGAACGGG-----TTCACGGTTCCGGTGACCCAC 125102 Query 35217 AGGTGACGGCCTGCCGGAATCATCTTGAACTCGGTGATGAGCCGGATCAGTTGCTCCCGC 35276 ||||| || || ||||| | ||||||||| | | ||| || || || | ||| ||| Sbjct 125103 AGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGC 125162 Query 35277 TCGTCTGGCTGCTGGTACCTGGCATCGACCAGGGCCAGGTTGCCGTCGACCACACGCTCG 35336 |||| || || | || ||| | |||||||||||||||||||||| | Sbjct 125163 TCGTTCGGGAGCCAGGTTGAGGACGGGACGTAGCCCAGGTTGCCGTCGACCACACGTGAG 125222 Query 35337 ACCGTCTCGGGCCACGTCTCGTTCGTGCCGTCAGGCTTGACGCGGGAGTAGGTCCGCTTG 35396 || |||||| ||| ||||| ||||| ||||||||||||| ||| ||||||||| | | Sbjct 125223 ACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCG 125282 Query 35397 TAGAC 35401 || || Sbjct 125283 TATAC 125287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163524170274420