Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023716.1 Length=53177 Score E Sequences producing significant alignments: (Bits) Value seq4597 122 3e-23 seq139035 86.0 2e-12 >seq4597 Length=157418 Score = 122 bits (134), Expect = 3e-23 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 34855 GAACTGCTCATCGACCTCGACCGAGATGTTCGTCGTCCAGTGCGATCCCGACTCGGCCTT 34914 |||| | || || |||||||| ||||||||||| |||||||| | | | |||||||| Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTT 124471 Query 34915 GCAGTTGATGAACTCCTCGATTTGAGGGTCGTCCCAGTGCATCATCGACATGCGTGCGGA 34974 |||||||||||| || || || |||||||||||| |||||| | ||| || ||||| Sbjct 124472 GCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGA 124531 Query 34975 GCGCCGCACACCTCCCGCGACAACACACTGAGCGATGGCGTGATCGACCTCCATCGC 35031 || || |||| || ||||| || | |||||| |||| |||| || ||| || Sbjct 124532 CCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGC 124588 >seq139035 Length=1904 Score = 86.0 bits (94), Expect = 2e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 32859 CGTGCTCCAGCACCGATTCGTGGCCCACGTCGAGGATGTGCTCGAGATAGGTCTCGTTGG 32918 |||||||||||| ||| ||||||||| |||||||||||| || |||| |||| | Sbjct 1547 CGTGCTCCAGCAGCGAGAGGTGGCCCACCTCGAGGATGTGCCGCAGGTAGGCGGCGTTCG 1606 Query 32919 TGGCCGTGGCCGGGTTCGGACGGTTGAAGGACTGGTAGCAGGCGCGACCGGCGAACTCCG 32978 ||||||| ||||| || | || ||||||||| || || |||||||||||| Sbjct 1607 TGGCCGTCCGGGGGTTGGGCTTCTCCCAGCTCTGGTAGCACGCACGTCCGGCGAACTCCA 1666 Query 32979 CGAGT 32983 ||||| Sbjct 1667 CGAGT 1671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169485291285594