Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023731.1 Length=53526 Score E Sequences producing significant alignments: (Bits) Value seq4597 122 3e-23 >seq4597 Length=157418 Score = 122 bits (134), Expect = 3e-23 Identities = 596/921 (65%), Gaps = 52/921 (6%) Strand=Plus/Plus Query 34927 GTCGACCTCGACCGAGATGTTCGTCGTCCAGTGCTC--ACCGGAGGTGGCCTTGGCGTTG 34984 ||| |||||||| ||||||||||| |||||||| ||| || ||||||| |||| Sbjct 124421 GTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACC--AGTCGGCCTTGCAGTTG 124478 Query 34985 ATGAACTCCTCGACCTGCGGGTCCGCCCAGTACATCATCGACATCCGCGCCGACCGGCGA 35044 ||||| || ||| | |||||| ||||| |||||| | ||| ||||| ||||| || Sbjct 124479 ATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGT 124538 Query 35045 ACACCGCCGGCCACCACGCACGAAGCGATGGCGTGATCGATCGTCATCGCGTCGATCCCG 35104 |||| || || || ||| | | |||||| |||| |||||| ||| || ||||| ||| Sbjct 124539 GCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCG 124598 Query 35105 GTCAGCTTCAAATCCACGTTGGC--GCTGAGGATCTTGCAGACCTTGATCAGC-ATCTCC 35161 ||||| | | | |||| | | ||||| | | || ||| | | || || Sbjct 124599 GTCAGGTG--ACGGCCGGTTGCCTTGTTGAGGGTGTCTGTGATGCTGACAATCGATGTC- 124655 Query 35162 GCGAACGGTTGCGGGCCGCTGGCCTGACCGCCGAACGTCTTGAGC--TTCGCCCCGACAG 35219 || || ||| ||||| || || ||||| ||||| | | | |||| | | Sbjct 124656 GCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGCCGTGTCCT 124715 Query 35220 GGCGCACCCGAGACACGTCGTAGACGCGCTGGAAGTGGCTGACCTCGTCCCGGTAGTGGG 35279 || | || || |||| ||||| | | || || |||| || ||| | | Sbjct 124716 CTGACATCGGA--CAGGTCGAAGACGAGTCCG---TGCATGCCCTCTTC--GGTCGACG- 124767 Query 35280 TGTCGATCAGGTCGGTCAGGGCTGCCGCCCAGCCCTCACGCGAGTCCTCGACCTCGAAGG 35339 |||| |||||||| | ||||| ||||||||| || | |||||| || | | Sbjct 124768 TGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGACATGAG 124827 Query 35340 CACCGACCCAGTCCGGGTCGTACTCGGTCGACAGGATCCCCGCCGCCTCCATCGC--CT- 35396 | | | ||||| | | || | ||||| | || ||| |||| | | || Sbjct 124828 TGCGGCAGCTTTCCGGCGCCTTGTCCATGAACAGGCTGCCTGCCTGCTCCTTGGTTGCTG 124887 Query 35397 CGTAGTCCGGGTG-GTCCCGGTCGCAGACGATGTGGACGAACAGCTCCTGCTGCACCGGC 35455 ||||||||||||| | | ||| || | || | |||||||| ||||| | || Sbjct 124888 CGTAGTCCGGGTGAGACTCGG-CGATGGTGACGCCCACGAACAG-----GCTGCCCAGGA 124941 Query 35456 CCGT---AGTG--CTCGAGGTAGTGGTTCGAGTAGTTGGCCCCGACTCCCCCGCCCTCCA 35510 || |||| || || ||| | ||||||||||| ||||| || |||||||| | Sbjct 124942 TCGGCTGAGTGGCCTTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCGCCGCCCTCGA 125001 Query 35511 TCAGGCGCATGAACGTGA---ACTCGAAGTGACCCGAGACCTGCTCGGGCCATCCGGCCA 35567 ||| || | ||| || ||| |||||| | | || | | |||||||| | Sbjct 125002 ACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGACCATCCGGAGA 125058 Query 35568 CCCAGCAGTTGAAGAGGTGCTGAGCGTTCTTCACGC--CCGACG-CCCAGAGGTGTCGGC 35624 | | |||||| ||| || || |||||| ||| | |||| ||||| || | Sbjct 125059 CGAAACAGTTGC-GAGA----GAACGGG-TTCACGGTTCCGGTGACCCACAGGTGGCGTC 125112 Query 35625 CGGCCGGAAGGAGCTTGAACTCCAACATCATTCGGATGAGTTCGGCTCGCTCATCAGGTA 35684 ||||||| || | |||||| | | |||| || | || | ||||| | || | Sbjct 125113 CGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCGTTCGGGA 125172 Query 35685 GCT-GGTGCCGTACGTCAACGAGTCGTAGGTTGCCATCCACCACTCGCTCGACGGTCTCG 35743 || ||| | ||| | || | |||||||| || ||||| || |||||||||| Sbjct 125173 GCCAGGTTGAGGACGGGACGTAGCCC-AGGTTGCCGTCGACCACACGTGAGACGGTCTCG 125231 Query 35744 GGCCAGGTCTCCTTGGAGCCGTCAGGCTTGGTGCGGGCGTAGGTCCGGTTGTAGACCAGC 35803 ||| |||||||| | |||||||||||| |||| ||||||||||| ||| ||| | Sbjct 125232 AACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTATACCTCC 125291 Query 35804 TCTCCTGTTGGGCCCCACGGG 35824 | || | || |||||| || Sbjct 125292 TTGCCGATCGGTCCCCACTGG 125312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170598416610848