Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023732.1 Length=69279 Score E Sequences producing significant alignments: (Bits) Value seq219192 105 3e-18 >seq219192 Length=699 Score = 105 bits (116), Expect = 3e-18 Identities = 232/346 (67%), Gaps = 10/346 (3%) Strand=Plus/Plus Query 50795 GCAT-GAGAGCGCGGCGGCGTCGGGCGCGGCGCACCTGCTGAGCTTCACCGGTACGGACT 50853 |||| ||| ||| ||||| ||||| | |||||||| ||| ||| || |||| Sbjct 6 GCATCGAGTCCGCAGCGGCCGGTGGCGCCGGACACCTGCTCTCGTTCCTCGGCACCGACT 65 Query 50854 CGCTGGTGTCGCTGGATTGGATCGACCGTTACTACGGCGGCGATTACG------TGGCGG 50907 || || |||||| || | ||||||| |||||| ||||| ||| |||||| Sbjct 66 CGATGCCGTCGCTCGACTTCGTCGACCGGTACTACCCGGGCGACGACGGACTCGTGGCGG 125 Query 50908 GTTCTGTTCCGGCTACCGAGCACTCGGTGATGTGTACCGGCATTGAGACGGTCGGGGAGC 50967 || ||||| ||||||||| |||||||| | || | | | | |||||||| Sbjct 126 CGAGCGTCCCGGCGACCGAGCACAGCGTGATGTGCGTCCGC---GGGGCCGACGGGGAGC 182 Query 50968 TTGAGACGTTTAGGCGGCTGCTGGACCTGTACCCGTCCGGCATCGTTAGCGTCGTTAGCG 51027 | |||||||| || | | || ||| | |||||| | |||||||| | || |||| Sbjct 183 TCGAGACGTTCGAGCAGATCCTCGACGTCTACCCGACGGGCATCGTGTCGGCGGTCAGCG 242 Query 51028 ACACGTTCGACCTGTGGAAGGTGCTAACCACGTACCTGCCGACGCTGTATAAGCAGATCG 51087 || |||||||||| ||||| | ||| | || ||| ||| | | | |||| Sbjct 243 ACGGCTTCGACCTGTTCAAGGTCATCACCGAGACGCTCCCGCAGCTCAAGGACCGGATCA 302 Query 51088 TGGGCCGGGACGGCAAGCTGGTCATTCGGCCTGACTCCGGCGATCC 51133 || || ||||||||||| || || || || ||||| || || || Sbjct 303 CCGGGCGCGACGGCAAGCTCGTGATCCGCCCGGACTCGGGTGACCC 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 220819776150120