Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_023744.1
Length=60588
Score E
Sequences producing significant alignments: (Bits) Value
seq84152 477 4e-130
seq134864 196 2e-45
seq231474 165 3e-36
seq12676 161 4e-35
seq12675 120 1e-22
>seq84152
Length=5826
Score = 477 bits (528), Expect = 4e-130
Identities = 650/900 (72%), Gaps = 28/900 (3%)
Strand=Plus/Plus
Query 49612 CTGTCGCCGGGCAACTACAACCGCGACACCGATCGTTTCCCGTGCACCGCCGGCCGTATC 49671
||||| ||||| |||||||||||| |||||||||| ||| ||| |||||| | || |||
Sbjct 4605 CTGTCACCGGGGAACTACAACCGCAACACCGATCGCTTCGCGTTCACCGCGGCGCGGATC 4664
Query 49672 GCCACCCTGACCGACCTCGCCGGCCGCGGCACGGACGGCATCCCAGCGGTTGACCTGTCG 49731
||| | || ||| | | ||||| | | ||||| || ||||| |
Sbjct 4665 GCCGCACT---CGAGG-CACAGGCCGAGTCC--GACGGTGTC---------GACCTCGGG 4709
Query 49732 CACTCACCGAAGTGGCGGGAACAGCTCGGAAGCCTCGGCGGCGGTAACCATTTCATCGAA 49791
||||| ||||||||| || |||||||| ||||||||||| ||||| ||||||||
Sbjct 4710 CACTCGAAGAAGTGGCGTGAGCAGCTCGGGTCGCTCGGCGGCGGCAACCACTTCATCGAG 4769
Query 49792 CTATGCCTGGACGAAACCGGCCGGGTGTGGCTGTTCCTGCACTCCGGGTCGCGTGGCGTC 49851
|| ||||| ||||| ||| ||||||||| |||||||||||||||| ||||| || |||
Sbjct 4770 CTGTGCCTCGACGAGTCCGATCGGGTGTGGATGTTCCTGCACTCCGGTTCGCGGGGTGTC 4829
Query 49852 GGCAACAAGATCGCCCAAAAGCACATCAAGGTCGCGCAGAAACTCATGGACCGCTGGTGG 49911
|||||| |||||| || |||||| | |||||||||| || || | | ||||
Sbjct 4830 GGCAACCGGATCGCGCAGCGACACATCGCGATCGCGCAGAAGCT---GGCCAGGAAGTGG 4886
Query 49912 ---ATTCAGCTCCCAAGCCCCGACCTGGCGTACTTGCCGCAAGGCACACCGGAGTTCGCC 49968
|| |||||| | ||| ||||| |||||| ||||| | || |||||| |||
Sbjct 4887 CACATCGTGCTCCCGAACCCGGACCTCGCGTACCTGCCGTCCGAGACGCCGGAGCTCGAG 4946
Query 49969 GACTATCTGCGGGAGCTGCACTGGGCGCAGCGGTTCGCGCTAGAGAACCGCGCCGAAATG 50028
| || || ||||| ||| ||||| |||||||||||||| ||||||||||| || |||
Sbjct 4947 GTGTACCTCCGGGATCTGGCGTGGGCACAGCGGTTCGCGCTCGAGAACCGCGCTGAGATG 5006
Query 50029 ATGGACCGTTTCGCTATCGTGTTCGGCGAGTGGATCGGGCACCCCACCGGCGGGGCGCTG 50088
||||| || ||| | ||||| | ||| | || ||| | | | ||| |
Sbjct 5007 ATGGATCGCTTCCGGCAGGCGTTCGCGCACTGGGTAGGTCACGACGGTGACCCGGCCGAG 5066
Query 50089 GTGGAAACCA--CGG-TGAACACGCACCACAACTACACGACGCAGGAACGGCACGGCGGC 50145
| || ||| ||| | ||||| |||||||||||||| | || || |||||||||
Sbjct 5067 CTCGAGACCGAGCGGATCAACACCCACCACAACTACACCGTCCGAGAGCGACACGGCGGC 5126
Query 50146 CGCGACGTGTGGCTGACCCGCAAGGGCGCCATCGACGCGCACGCCGGCGTGATGGGCCTG 50205
||||||||||||||||||||||| || ||||||||||||| || ||| |||| |
Sbjct 5127 AAGGACGTGTGGCTGACCCGCAAGGGTGCGATCGACGCGCACGAGGGTGTGCGGGGCATC 5186
Query 50206 ATCCCGGGCAGCATGGGCACCCCGTCATACGTGGTGCGCGGCAAGGGCAACCCGGC--CG 50263
||||||||| ||||| || | ||| ||| | ||| ||||||||| || |||| ||
Sbjct 5187 ATCCCGGGCTCGATGGGGACGCGGTCCTACATCGTGACCGGCAAGGG--ACACGGCGGCG 5244
Query 50264 GGCTGTGCTCGGCGCCGCACGGCGCCGGCCGCCGGCATTCCCGCACCCAAGCCCGGAAGC 50323
| ||||| ||||||||||||||||| || || ||| || || || | ||| | |
Sbjct 5245 GTCTGTGTTCGGCGCCGCACGGCGCGGGGCGTCGGTTCTCACGGGCCGAGGCCAAGCGTC 5304
Query 50324 TGTTCACCGAGGCCGACCTCGCCGACCGGATGCAGGGTATCGAGTACCGGCACGGGGACG 50383
|| |||||||||||| |||| | | |||| || ||||||||||||||||||| |
Sbjct 5305 GGTACACCGAGGCCGATCTCGAGGCCGCGATGACCGGGATCGAGTACCGGCACGGGGCGG 5364
Query 50384 CGTGGGTTGACGAAATCCCGGACGCCTACAAGCCAATTCAGACCGTGATGGCCGACGCCG 50443
|||| | ||||| |||||| | || |||||| || | |||||||||||||||||
Sbjct 5365 AGTGGATCGACGAGATCCCGCAGGCGTACAAGAGCATCGACGTCGTGATGGCCGACGCCG 5424
Query 50444 CCGACCTCGTGGAGGTTGTGCACGAGCTGCGGCAGATTCTCAACGTCAAGGGCAAGTGAA 50503
||||||| | | | ||| ||||| ||| | |||||||| ||||||| ||||
Sbjct 5425 AGCGCCTCGTGTCGATCGACCACACCCTGCGTCAGGTGCTCAACGTGAAGGGCACCTGAA 5484
Score = 230 bits (254), Expect = 9e-56
Identities = 180/215 (84%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 49326 GCTGCTCAATTTCGCCTCCGAAATCGACGCGCTCACACTGGACCAGGCCAAGCAGACCGC 49385
||||||||| ||||||||||| ||||||| | || | |||||||||||| |||||||
Sbjct 4378 GCTGCTCAACTTCGCCTCCGAGATCGACGAGAAGACGATCGACCAGGCCAAGGAGACCGC 4437
Query 49386 CGGCCTGCCGTTCGTCCACCCGCATGTGGCGCTGATGCCCGACGCGCACGCCGGCAAGGG 49445
| ||||| ||||| |||||||| |||||| ||||||| || |||||| |||||||||
Sbjct 4438 AGCGCTGCCCTTCGTGCACCCGCACGTGGCGTTGATGCCGGATGCGCACTACGGCAAGGG 4497
Query 49446 TTCATCGGTCGGCACCGTCATCCCGACTATCGACGCCGTGATCCCGGCCGCGGTGGGCGT 49505
|| ||||||| |||||||||||||| |||||||||| |||||||||||||| || ||
Sbjct 4498 ATCCGCGGTCGGTACCGTCATCCCGACGGTCGACGCCGTCATCCCGGCCGCGGTCGGGGT 4557
Query 49506 GGACATCGGCTGCGGGATGATCGCCGCCCGCACCA 49540
|||||||| ||||| |||||||||| ||| ||||
Sbjct 4558 CGACATCGGGTGCGGCATGATCGCCGTCCGGACCA 4592
>seq134864
Length=649
Score = 196 bits (216), Expect = 2e-45
Identities = 447/660 (68%), Gaps = 47/660 (7%)
Strand=Plus/Minus
Query 49801 GACGAAACCGGCCGGGTGTGGCTGTTCCTGCACTCCGGGTCGCGTGGCGTCGGCAACAAG 49860
||||| |||||||| | ||| ||||||||||||||||||| || || ||||||||| |
Sbjct 633 GACGAGACCGGCCGCATCTGGTTGTTCCTGCACTCCGGGTCCCGCGGTGTCGGCAACCGG 574
Query 49861 ATCGCCCAAAAGCACATCAAGGTCGCGCAGAAACTCATGGACCGCTGGTGGATTCAGCTC 49920
|||||||| | |||||| ||| || | ||| |||| | |||| ||||
Sbjct 573 ATCGCCCAGCACCACATCGGGGTTGCCCGGAAGTCGATGGTGGACAACGGGATCGAGCTG 514
Query 49921 CCAAGCCCCGACCTGGCGTACTTGCCGCAAGGCACACCGGAGTTCGCCGACTATCTGCGG 49980
|| | ||| || |||||| || | | ||||| |||||||| || ||| |||
Sbjct 513 GCAGATCGCGATCTCGCGTACCTGGTGGAGGGCACCGAGGAGTTCGACGCCTACCTGGCC 454
Query 49981 GAGCTGCACTGGGCGCAGCGGTTCGCGCTAGAGAACCGCGCCGAAATGATGGACCGTTTC 50040
||||| |||||| |||| |||||| | ||||||| ||| |||||||| ||| ||
Sbjct 453 GAGCTCACCTGGGCACAGCAGTTCGCCGCACTCAACCGCGACGAGATGATGGAGCGTGTC 394
Query 50041 GCTATCGTGTTCGGCGAGTGGA--TCGGGCACCCCACCGGCGGGGCGCTGGTGGAAACCA 50098
| | ||| | || | || || | ||||| || | ||| || ||
Sbjct 393 G--------TGCGGTCACTGCAGTTCTGG------ATCGGCGCGGAGGTGGAGGTGTCCG 348
Query 50099 CGGTGAACACG-----CACCACAACTACACGACGCAGGA-ACGG--CACGGCG-GCCGCG 50149
|| | | || ||||||||||||||| | | || ||| ||||| | || ||
Sbjct 347 AGG--ACCTCGGCTGCCACCACAACTACACGGCCCGCGAGACGCACCACGGTGAGCTGC- 291
Query 50150 ACGTGTGGCTGACCCGCAAGGGCGCCATCGACGCGCACGCCGGCGTGATGGGCCTGATCC 50209
||||| || |||||||||| |||||| |||| | | |||||| || |||||||
Sbjct 290 ---TGTGGGTGTCCCGCAAGGGTGCCATCAACGCCGAGGTCGGCGTCCCCGGGCTGATCC 234
Query 50210 CGGGCAGCATGGGCACCCCGTCATACGTGGTGCGCGGCAAGGGCAAC---CCGGCCGGGC 50266
|||| ||||| || |||| ||||| ||| ||||| ||| ||| | | || |
Sbjct 233 CGGGGTCGATGGGTACGGCGTCGTACGTCGTGTCCGGCAGGGGGAACGAGCAGTCC---C 177
Query 50267 TGTGCTCGGCGCCGCACGGCGCCGGCCGCCGGC--ATTCCCGCACCCAAGCCCGGAAGCT 50324
||||| || |||||||| || ||||| ||| | || || || | || || |||
Sbjct 176 TGTGCAGTGCACCGCACGGAGCAGGCCG--GGCCTACTCGCGGACGAAGGCGCGCAAGAC 119
Query 50325 GTTCACCGAGGCCGACCTCGCCGACCG-GATGCAGGGTATCGAGTACCGGCACGGGGACG 50383
||||| | | |||||| || | | | |||| || ||||||||||| || ||| |
Sbjct 118 CTTCACGGTCGACGACCT-GCGGGCGGCGATGGTCGGGATCGAGTACCGCGACACGGAGG 60
Query 50384 CGTGGGTTGACGAAATCCCGGACGCCTACAAGCCAATTCAGACC--GTGATGGCCGACGC 50441
||| || ||||| ||||| | |||||||||| || |||| ||||||||||| ||
Sbjct 59 CGTTCGTCGACGAGATCCCCGGCGCCTACAAGGACAT--CGACCAGGTGATGGCCGATGC 2
>seq231474
Length=516
Score = 165 bits (182), Expect = 3e-36
Identities = 337/491 (69%), Gaps = 25/491 (5%)
Strand=Plus/Plus
Query 49812 CCGGGTGTGGCTGTTCCTGCACTCCGGGTCGCGTGGCGTCGGCAACAAGATCGCCCAAAA 49871
||| || |||||||||||||||||||| || || ||||||||||||||||||||||| |
Sbjct 9 CCGCGTCTGGCTGTTCCTGCACTCCGGCTCCCGCGGCGTCGGCAACAAGATCGCCCAGCA 68
Query 49872 GCACATCAAGGTCGCGCAGAAACTCATG--GACCGCTGGTGGATTCAGCTCCCAAGCCCC 49929
||||||||||||||| || || || || ||||||||||| | || || ||||
Sbjct 69 CCACATCAAGGTCGCG-AGCGACCTGTGCCGA-CGCTGGTGGATCGACCTGCCCGACCCC 126
Query 49930 GACCTGGCGTACTTGCCGCAAGG----CACACCGGAGTTCGCCGACTATCTGCGGGAGCT 49985
||||| || ||| || | | || |||| |||| | ||| | || ||| |
Sbjct 127 GACCTCGCCTACCTGGTGGAGGGGGACGACAC----GTTCTGGGCCTACATCCGCGAGAT 182
Query 49986 GCACTGGGCGCAGCGGTTCGCGCTAGAGAACCGCGCCGAAATGATGGACCGTTTCGCTAT 50045
|| ||||| |||| ||||| || ||||||| || |||||| |||| ||
Sbjct 183 GCGGTGGGCCCAGCACTTCGCCCTGCTCAACCGCGAGGAGATGATGCACCGCGTCCAGGA 242
Query 50046 CGTGTTCGGCGAGTGGATCGGGCACCCCACCGGCGGGGCGCTGGTGGAAACCACGGTGAA 50105
|| || ||| | || | || | | ||| | || || ||| ||| | ||
Sbjct 243 GGTCGTC-GCG-GACGAGCTGG-GCGCGACC------GTGCAGGCGGACGAGACGATCAA 293
Query 50106 CACGCACCACAACTACACGACGCAGGAACGGCACGGCGGCCGCGACGTGTGGCTGACCCG 50165
| |||||||||||||| || || || ||| ||||| |||||| || ||||
Sbjct 294 CTGCCACCACAACTACACCGAGCGCGAGCGCGTGTTCGGTCGCGAGGTGTGGGTGTCCCG 353
Query 50166 CAAGGGCGCCATCGACGCGCACGCCGGCGTGAT--GGGCCTGATCCCGGGCAGCATGGGC 50223
||||||||| ||| || || || | ||||| || |||||||| ||| ||||||
Sbjct 354 CAAGGGCGCGATC--CGTGCGGGCAAGGGTGATCGCGGGCTGATCCCCGGCTCGATGGGC 411
Query 50224 ACCCCGTCATACGTGGTGCGCGGCAAGGGCAACCCGGCCGGGCTGTGCTCGGCGCCGCAC 50283
|| |||| ||||| || ||| |||| ||||| | |||| ||||| ||||||
Sbjct 412 ACGGCGTCGTACGTCGTCACGGGCCTGGGCTACCCGCCGTCGCTGATGTCGGCCCCGCAC 471
Query 50284 GGCGCCGGCCG 50294
|| ||||||||
Sbjct 472 GGGGCCGGCCG 482
>seq12676
Length=358
Score = 161 bits (178), Expect = 4e-35
Identities = 178/237 (75%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 49348 ATCGACGCGCTCACACTGGACCAGGCCAAGCAGACCGCCGGCCTGCCGTTCGTCCACCCG 49407
||||||| ||||| || | ||||||||||||||||||| || |||| |||
Sbjct 122 ATCGACGACCTCACGCTCGCGCAGGCCAAGCAGACCGCCGAGCTCGACATCGTGTCGCCG 181
Query 49408 CATGTGGCGCTGATGCCCGACGCGCACGCCGGCAAGGGTTCATCGGTCGGCACCGTCATC 49467
| ||||||||||||| ||||||||| |||||||| | ||||||| ||||||||
Sbjct 182 TACCTGGCGCTGATGCCGGACGCGCACCTGGGCAAGGGAGCGACGGTCGGTTCCGTCATC 241
Query 49468 CCGACTATCGACGCCGTGATCCCGGCCGCGGTGGGCGTGGACATCGGCTGCGGGATGATC 49527
|| || | ||||| | |||||||||||||| || ||||||||||||||||||||| |
Sbjct 242 CCCACCAGGGACGCGATCATCCCGGCCGCGGTCGGGGTGGACATCGGCTGCGGGATGCGC 301
Query 49528 GCCGCCCGCACCATCTACACCGAGGACGACCTGGACGGCCGGGACCTCGCCGCGCTG 49584
|| | | | ||| | || || | ||| |||| |||||| || ||||| |||||
Sbjct 302 GCGGTCAGGACCCAGTTCAGCGTCGCCGATCTGGCCGGCCGCGATCTCGCAACGCTG 358
>seq12675
Length=485
Score = 120 bits (132), Expect = 1e-22
Identities = 115/146 (79%), Gaps = 1/146 (1%)
Strand=Plus/Minus
Query 49477 GACGCCGTGATCCCGGCCGCGGTGGGCGTGGACATCGGCTGCGGGATGATCGCCGCCCGC 49536
|||||| | |||||||| ||||| |||||||||||||| ||||||||| || | |||
Sbjct 176 GACGCCATCATCCCGGCGGCGGTCGGCGTGGACATCGGGTGCGGGATGCGGGCGGTCCGG 117
Query 49537 ACCATCTACACCGAGGACGACCTGGACGGCCGGGACCTCGCCGCGCTGCGGCACGCCATC 49596
||| | | || | ||| |||| ||||||||| || |||||||| |||||| | |||
Sbjct 116 ACCCAGTTCGTCGTCGCCGATCTGGCCGGCCGGGATCTGGCCGCGCTTCGGCACTCGATC 57
Query 49597 GAGGGCGCGATCCCGCTGTC-GCCGG 49621
||| ||| ||||||||||| |||||
Sbjct 56 GAGCGCGGCATCCCGCTGTCGGCCGG 31
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 193122459725300
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