Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_024135.1 Length=42392 Score E Sequences producing significant alignments: (Bits) Value seq74518 289 8e-74 seq189415 100 8e-17 >seq74518 Length=2537 Score = 289 bits (320), Expect = 8e-74 Identities = 424/592 (72%), Gaps = 16/592 (3%) Strand=Plus/Minus Query 24086 GACACGCTGTTCGCCGACGTGTCCGAATGGCAAGTCCCCGTGGACGACAGCTACCCGTAC 24145 ||||| || ||||||||||| ||| | | || || ||||| |||||||||||||||||| Sbjct 1371 GACACCCTCTTCGCCGACGTCTCCTACTTCCAGGTACCCGTCGACGACAGCTACCCGTAC 1312 Query 24146 CTCGTGCTGTCGATCCGCGCGAACGACGGCACTCACCGCGACAACAAGTTCGCGCAGAAC 24205 | | ||||||||||| ||||||||||||| ||||||| | ||||| |||||| Sbjct 1311 CCGATCCTGTCGATCCGTTCGAACGACGGCACATTCCGCGACCCGCACTTCGCACAGAAC 1252 Query 24206 TACGCGTGGATGAAACGCGCGCTGGACGATGGCCGGCTGCGTTGCGGCATCGTGTATTTC 24265 ||||||||||| ||| || ||| || || || ||| ||| ||||| || | | Sbjct 1251 TACGCGTGGATCCGCCGCAGCCTCGACCGCGGGCGCCTCCGTGTCGGGATCGTCTACTGC 1192 Query 24266 TACTGGCGGCCGAACTGGC---AGGCAGCCATCGCGACCCTGCAGGACATGATC-AACGC 24321 ||| ||| |||||||||| || | || | | ||| ||| |||||||||| | || Sbjct 1191 TACCTGCGCCCGAACTGGCTCGAGACCGCGAAC---ACCATGCGGGACATGATCGATCGT 1135 Query 24322 GAACGGTGGTCTACATCCGCGCGTCGCGATCATGATCGACGTCGAGCGGGGCGGAAACCC 24381 | || || || ||||| | || | | | ||| |||||||||| ||||| ||||| Sbjct 1134 G-CGGGCGGACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCCGGCGGGAACCC 1076 Query 24382 CGGCGGCGACTTCTCCGACTCGCTCAACGCAACCGAC--GACGCGCTGTCGCAGTGGGTG 24439 ||||||||| || |||| | ||||| ||| || || | | |||| | | | Sbjct 1075 CGGCGGCGATGCGTCGGACTGGATCAACCGCACCTACTGGAACCTC-GTCGAATACGCCG 1017 Query 24440 GGGG--ATCCGCGCCGCGTCATCGCGTACGGCAACGTGGGCGACCTAAACAGCATGTGGC 24497 | || | | || || || |||| |||| |||| || |||| | | | ||||||| Sbjct 1016 GTGGCAACGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGGC 957 Query 24498 GCAACCGACGTGAAGACCAG---TTCATCGTCGCCGCATACGGCAGCAATCCAAGCTTCC 24554 | || | | | || | | |||| ||||| |||||| ||||||| | | | Sbjct 956 GTGTTCGCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAACCTGG 897 Query 24555 CCGGCAAGATCGCGCACCAGTACACCGACGGCCAGGGATACGGCGGCGGCCTGCCCGAAG 24614 |||| ||||||||||||||||||||||||||| ||| | ||||||||| || ||||||| Sbjct 896 CCGGACAGATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGAAG 837 Query 24615 GCTGCCCGCCATTCGGCAACTGCGACATGAACAGCGCCGACGGCTACACCGC 24666 | ||||| ||||||||||||||||||||| |||||||||| ||| || Sbjct 836 GGGCACCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGGCCTCACGGC 785 >seq189415 Length=2896 Score = 100 bits (110), Expect = 8e-17 Identities = 146/199 (73%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 31497 GATCGTGCGCTGTGCCCGCAAACGGATCCCGACGTGTTCTTCCCCGAAAAGGGCGGCAGC 31556 || || ||||||||| |||| || || ||||| | |||||||||||| ||||||||| Sbjct 563 GACCGGGCGCTGTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGCGGCTCG 504 Query 31557 ACCAAAGAAGCGAAAGCG-ATCTG--TGGGCTGTGCGATGTCCGCAACGAATGCCTGGAG 31613 ||| || || ||||| ||||| |||||| | | || || || ||||| ||| Sbjct 503 ACCCGCGAGGC-CAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGC--GGAGTGCCTCGAG 447 Query 31614 TACGCGTTGGCGCACGACGAACGATTCGGCATCTGGGGCGGCTTATCCGAGCGTGACCGG 31673 |||||| || | ||||| || ||||| ||||||||||| | |||||||| || || Sbjct 446 TACGCGCTGCACAAGGACGAGCGGTTCGGTATCTGGGGCGGTCTCTCCGAGCGGGAGCGT 387 Query 31674 CG-CGCAATCAAACGTGGC 31691 || ||| |||| || ||| Sbjct 386 CGTCGC-CTCAAGCGCGGC 369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135086848211484