Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_024135.1
Length=42392
Score E
Sequences producing significant alignments: (Bits) Value
seq74518 289 8e-74
seq189415 100 8e-17
>seq74518
Length=2537
Score = 289 bits (320), Expect = 8e-74
Identities = 424/592 (72%), Gaps = 16/592 (3%)
Strand=Plus/Minus
Query 24086 GACACGCTGTTCGCCGACGTGTCCGAATGGCAAGTCCCCGTGGACGACAGCTACCCGTAC 24145
||||| || ||||||||||| ||| | | || || ||||| ||||||||||||||||||
Sbjct 1371 GACACCCTCTTCGCCGACGTCTCCTACTTCCAGGTACCCGTCGACGACAGCTACCCGTAC 1312
Query 24146 CTCGTGCTGTCGATCCGCGCGAACGACGGCACTCACCGCGACAACAAGTTCGCGCAGAAC 24205
| | ||||||||||| ||||||||||||| ||||||| | ||||| ||||||
Sbjct 1311 CCGATCCTGTCGATCCGTTCGAACGACGGCACATTCCGCGACCCGCACTTCGCACAGAAC 1252
Query 24206 TACGCGTGGATGAAACGCGCGCTGGACGATGGCCGGCTGCGTTGCGGCATCGTGTATTTC 24265
||||||||||| ||| || ||| || || || ||| ||| ||||| || | |
Sbjct 1251 TACGCGTGGATCCGCCGCAGCCTCGACCGCGGGCGCCTCCGTGTCGGGATCGTCTACTGC 1192
Query 24266 TACTGGCGGCCGAACTGGC---AGGCAGCCATCGCGACCCTGCAGGACATGATC-AACGC 24321
||| ||| |||||||||| || | || | | ||| ||| |||||||||| | ||
Sbjct 1191 TACCTGCGCCCGAACTGGCTCGAGACCGCGAAC---ACCATGCGGGACATGATCGATCGT 1135
Query 24322 GAACGGTGGTCTACATCCGCGCGTCGCGATCATGATCGACGTCGAGCGGGGCGGAAACCC 24381
| || || || ||||| | || | | | ||| |||||||||| ||||| |||||
Sbjct 1134 G-CGGGCGGACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCCGGCGGGAACCC 1076
Query 24382 CGGCGGCGACTTCTCCGACTCGCTCAACGCAACCGAC--GACGCGCTGTCGCAGTGGGTG 24439
||||||||| || |||| | ||||| ||| || || | | |||| | | |
Sbjct 1075 CGGCGGCGATGCGTCGGACTGGATCAACCGCACCTACTGGAACCTC-GTCGAATACGCCG 1017
Query 24440 GGGG--ATCCGCGCCGCGTCATCGCGTACGGCAACGTGGGCGACCTAAACAGCATGTGGC 24497
| || | | || || || |||| |||| |||| || |||| | | | |||||||
Sbjct 1016 GTGGCAACGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGGC 957
Query 24498 GCAACCGACGTGAAGACCAG---TTCATCGTCGCCGCATACGGCAGCAATCCAAGCTTCC 24554
| || | | | || | | |||| ||||| |||||| ||||||| | | |
Sbjct 956 GTGTTCGCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAACCTGG 897
Query 24555 CCGGCAAGATCGCGCACCAGTACACCGACGGCCAGGGATACGGCGGCGGCCTGCCCGAAG 24614
|||| ||||||||||||||||||||||||||| ||| | ||||||||| || |||||||
Sbjct 896 CCGGACAGATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGAAG 837
Query 24615 GCTGCCCGCCATTCGGCAACTGCGACATGAACAGCGCCGACGGCTACACCGC 24666
| ||||| ||||||||||||||||||||| |||||||||| ||| ||
Sbjct 836 GGGCACCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGGCCTCACGGC 785
>seq189415
Length=2896
Score = 100 bits (110), Expect = 8e-17
Identities = 146/199 (73%), Gaps = 8/199 (4%)
Strand=Plus/Minus
Query 31497 GATCGTGCGCTGTGCCCGCAAACGGATCCCGACGTGTTCTTCCCCGAAAAGGGCGGCAGC 31556
|| || ||||||||| |||| || || ||||| | |||||||||||| |||||||||
Sbjct 563 GACCGGGCGCTGTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGCGGCTCG 504
Query 31557 ACCAAAGAAGCGAAAGCG-ATCTG--TGGGCTGTGCGATGTCCGCAACGAATGCCTGGAG 31613
||| || || ||||| ||||| |||||| | | || || || ||||| |||
Sbjct 503 ACCCGCGAGGC-CAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGC--GGAGTGCCTCGAG 447
Query 31614 TACGCGTTGGCGCACGACGAACGATTCGGCATCTGGGGCGGCTTATCCGAGCGTGACCGG 31673
|||||| || | ||||| || ||||| ||||||||||| | |||||||| || ||
Sbjct 446 TACGCGCTGCACAAGGACGAGCGGTTCGGTATCTGGGGCGGTCTCTCCGAGCGGGAGCGT 387
Query 31674 CG-CGCAATCAAACGTGGC 31691
|| ||| |||| || |||
Sbjct 386 CGTCGC-CTCAAGCGCGGC 369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135086848211484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |