Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_024366.1
Length=62661
Score E
Sequences producing significant alignments: (Bits) Value
seq84152 369 1e-97
seq134864 230 9e-56
seq231474 197 6e-46
seq171065 134 6e-27
seq74518 129 2e-25
seq47396 87.8 7e-13
seq20617 82.4 3e-11
>seq84152
Length=5826
Score = 369 bits (408), Expect = 1e-97
Identities = 603/858 (70%), Gaps = 37/858 (4%)
Strand=Plus/Plus
Query 53740 CGTTCACCGCGCCGCGCATCGAATACCTGGAAGACCTCGCCGACCGCAACCGCGTCAACC 53799
||||||||||| |||| |||| || || | | ||||| | || | ||| |||
Sbjct 4645 CGTTCACCGCGGCGCGGATCGCCGCACTCGAGGCACAGGCCGAGTCCGACGGTGTCGACC 4704
Query 53800 TGTCGCACTCCCCGAAGTGGCGCGAACAACTCGGCACACTCGGCGGCGGCAACCACTTCA 53859
| |||||| ||||||||| || || ||||| | ||||||||||||||||||||||
Sbjct 4705 TCGGGCACTCGAAGAAGTGGCGTGAGCAGCTCGGGTCGCTCGGCGGCGGCAACCACTTCA 4764
Query 53860 TCGAACTGTGCGTCGACCAGCACGGCCGGCTGTGGCTGTTCCTGCATTCCGGTTCACGCG 53919
|||| |||||| ||||| || || ||| ||||| |||||||||| |||||||| || |
Sbjct 4765 TCGAGCTGTGCCTCGACGAGTCCGATCGGGTGTGGATGTTCCTGCACTCCGGTTCGCGGG 4824
Query 53920 GTGTCGGCAACAAGATCGCCCAGAAGCACATCAAGATCGCGCAAGCCGAATGCGCCGAGC 53979
||||||||||| |||||| ||| |||||| ||||||||| ||| | | ||
Sbjct 4825 GTGTCGGCAACCGGATCGCGCAGCGACACATCGCGATCGCGCA----GAAGCTGGCCAGG 4880
Query 53980 ATGGTG----TCGAACTGCCCGGCGGCAACAAGGATCTAGCCTACCT--CGTCGAGGGCG 54033
| | | ||| || |||| ||| ||| || || ||||| |||| | ||
Sbjct 4881 AAGTGGCACATCGTGCT-CCCG-----AACCCGGACCTCGCGTACCTGCCGTCCGAGACG 4934
Query 54034 AACCGTCGTTCGGCGCGTACCTCGCTGAGCTGCGTTGGGCGCAACAGTTCGCGATGTTCA 54093
||| | ||| | ||||||| || ||| ||||| || | ||||||| | |
Sbjct 4935 --CCGGAGCTCGAGGTGTACCTCCGGGATCTGGCGTGGGCACAGCGGTTCGCGCTCGAGA 4992
Query 54094 ACCGCAACGAGATGATGGACCGGTACCGGCAAGCGTTCGCGCACTGGCTCGACATCGGTG 54153
||||| ||||||||||| || | |||||| ||||||||||||||| | | ||
Sbjct 4993 ACCGCGCTGAGATGATGGATCGCTTCCGGCAGGCGTTCGCGCACTGGGTAG------GTC 5046
Query 54154 TCGACGAGGCGCCAGTCGTCGAGATCGCCGGCGAACGCGTCAACGCGCACCACAACTACA 54213
||||| | || | || || ||| ||| || ||||| | |||||||||||||
Sbjct 5047 ACGACGGTGACCCGGCCG---AGCTCGAGACCGAGCGGATCAACACCCACCACAACTACA 5103
Query 54214 CCACCCAGGAGC-ACATCAACGGTGAGCTGGTGTGGGTGACCCGCAAGGGCGCCATCAGC 54272
|| || |||| ||| | ||| || |||||| ||||||||||||| || ||| |
Sbjct 5104 CCGTCCGAGAGCGACA-CGGCGGCAAGGACGTGTGGCTGACCCGCAAGGGTGCGATCGAC 5162
Query 54273 GCGCAACTCGGTGAGCGTGGCCTCATCCCCGGCAGCATGGGCACGGCCTCCTACGTCGTC 54332
||||| |||| ||| ||| ||||||| ||| ||||| ||| |||||| ||||
Sbjct 5163 GCGCACGAGGGTGTGCGGGGCATCATCCCGGGCTCGATGGGGACGCGGTCCTACATCGTG 5222
Query 54333 ACCGGTAAAGGCAACCCCGAAGGGCTGCATTCCGCGCCGCACGGCGCCGGCCGCCGCTAC 54392
||||| || || || || || ||| ||| |||||||||||||| || || || | |
Sbjct 5223 ACCGGCAAGGGACACGGCGGCGGTCTGTGTTCGGCGCCGCACGGCGCGGGGCGTCGGTTC 5282
Query 54393 TCCCGCACCAAGGCACGCAAG---CTGTTCACCGTCGACGACCTCGCAGACCG-TATGCG 54448
|| || || |||| |||| | || ||||| | ||| |||| || ||| |||
Sbjct 5283 TCACGGGCCGAGGC---CAAGCGTCGGTACACCGAGGCCGATCTCG-AGGCCGCGATGAC 5338
Query 54449 CGGCATCGAATACCGGCACGGTGAGGCGTGGGTCGACGAGATTCCCGACGCCTACAAGCC 54508
||| ||||| ||||||||||| | || |||| |||||||||| || | || ||||||
Sbjct 5339 CGGGATCGAGTACCGGCACGGGGCGGAGTGGATCGACGAGATCCCGCAGGCGTACAAGAG 5398
Query 54509 GATTGACGTTGTCATGCACGACGCCGAAGACCTCGTGTCGGTTGACGTCGAGCTGCGTCA 54568
|| ||||| || ||| ||||||||| |||||||||| | ||| | ||||||||
Sbjct 5399 CATCGACGTCGTGATGGCCGACGCCGAGCGCCTCGTGTCGATCGACCACACCCTGCGTCA 5458
Query 54569 AATCGTCAACGTCAAGGG 54586
| ||||||| |||||
Sbjct 5459 GGTGCTCAACGTGAAGGG 5476
Score = 84.2 bits (92), Expect = 9e-12
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 53405 CAACCCGAAACTCATCAACTTCGCCAGCGAGGTCGACGCCGAAACCATCACGCAGGCAGA 53464
||||| || || ||||||||||| |||| |||||| | || ||| ||||| |
Sbjct 4369 CAACCTCAAGCTGCTCAACTTCGCCTCCGAGATCGACGAGAAGACGATCGACCAGGCCAA 4428
Query 53465 ACAAATCGCCGAACTGCCATTCGTCTACCCGCACGTTGCGCTCATGCCCGACGCGCACGT 53524
| | ||| | ||||| ||||| |||||||||| ||| | ||||| || ||||||
Sbjct 4429 GGAGACCGCAGCGCTGCCCTTCGTGCACCCGCACGTGGCGTTGATGCCGGATGCGCACTA 4488
Query 53525 AGGCAAAGGCTCATCCGTCGGCACAGTCATCCCCAC 53560
||||| || || | ||||| || |||||||| ||
Sbjct 4489 CGGCAAGGGATCCGCGGTCGGTACCGTCATCCCGAC 4524
>seq134864
Length=649
Score = 230 bits (254), Expect = 9e-56
Identities = 445/644 (69%), Gaps = 47/644 (7%)
Strand=Plus/Minus
Query 53873 CGACCAGCACGGCCGGCTGTGGCTGTTCCTGCATTCCGGTTCACGCGGTGTCGGCAACAA 53932
|||| || |||||| | ||| |||||||||| ||||| || |||||||||||||||
Sbjct 634 CGACGAGACCGGCCGCATCTGGTTGTTCCTGCACTCCGGGTCCCGCGGTGTCGGCAACCG 575
Query 53933 GATCGCCCAGAAGCACATCAAGATCGCGC--AAGCCGAATGCGCCGAGCATGGTGTCGAA 53990
|||||||||| | |||||| | | || | ||| ||| | | || | || ||||
Sbjct 574 GATCGCCCAGCACCACATCGGGGTTGCCCGGAAGTCGATGGTG--GACAACGGGATCGAG 517
Query 53991 CTGCCCGGCGGCAACAAGGATCTAGCCTACCTCGTCGAGGGCGAACCGTCG--TTCGGCG 54048
||| | | || ||||| || ||||| || |||||| |||| | |||| ||
Sbjct 516 CTGGCAGATCGC------GATCTCGCGTACCTGGTGGAGGGC--ACCGAGGAGTTCGACG 465
Query 54049 CGTACCTCGCTGAGCTGCGTTGGGCGCAACAGTTCGCGATGTTCAACCGCAACGAGATGA 54108
| ||||| || ||||| ||||| || |||||||| |||||||| |||||||||
Sbjct 464 CCTACCTGGCCGAGCTCACCTGGGCACAGCAGTTCGCCGCACTCAACCGCGACGAGATGA 405
Query 54109 TGGACCG-GTACCGGCAAGCGTTCGCGCACTGGCTCGACATCGGTGTCGACGAGGCGCCA 54167
|||| || || ||| || ||||| | || | ||| || || |
Sbjct 404 TGGAGCGTGT---------CGTGCGGTCACTGC----AGTTCTGGATCGGCGCGGAG--- 361
Query 54168 GTCGTCGAGATCGCCGGCGAACGCGTCAACGCGCACCACAACTACACCACCCAGGAG-CA 54226
|| ||| | ||| || | || | | |||||||||||||| ||| ||| |
Sbjct 360 ---GTGGAGGTGTCCGAGGACCTCGGCTGC---CACCACAACTACACGGCCCGCGAGACG 307
Query 54227 CATCAACGGTGAGCTGGTGTGGGTGACCCGCAAGGGCGCCATCAGCGCGCAACTCGGTGA 54286
|| || |||||||||| |||||||| |||||||||| ||||||| ||| | |||| |
Sbjct 306 CACCA-CGGTGAGCTGCTGTGGGTGTCCCGCAAGGGTGCCATCAACGCCGAGGTCGGCGT 248
Query 54287 GCGTGGCCTCATCCCCGGCAGCATGGGCACGGCCTCCTACGTCGTCACCGGTAAAGGCAA 54346
| || || ||||| || ||||| ||||| || |||||||| |||| | || ||
Sbjct 247 CCCCGGGCTGATCCCGGGGTCGATGGGTACGGCGTCGTACGTCGTGTCCGGCAGGGGGAA 188
Query 54347 CCCCGAAGGGC---TGCATTCCGCGCCGCACGGCGCCGGCCGCCGCTACTCCCGCACCAA 54403
| | || | |||| | || |||||||| || ||||| |||||| || || ||
Sbjct 187 -CGAGCAGTCCCTGTGCAGT--GCACCGCACGGAGCAGGCCGGGCCTACTCGCGGACGAA 131
Query 54404 GGCACGCAAGCTGTTCACCGTCGACGACCTCGCAGACCG-TATGCGCGGCATCGAATACC 54462
||| |||||| ||||| ||||||||||| || | | | ||| ||| ||||| ||||
Sbjct 130 GGCGCGCAAGACCTTCACGGTCGACGACCT-GCGGGCGGCGATGGTCGGGATCGAGTACC 72
Query 54463 GGCACGGTGAGGCGTGGGTCGACGAGATTCCCGACGCCTACAAG 54506
| || ||||||| ||||||||||| |||| ||||||||||
Sbjct 71 GCGACACGGAGGCGTTCGTCGACGAGATCCCCGGCGCCTACAAG 28
>seq231474
Length=516
Score = 197 bits (218), Expect = 6e-46
Identities = 353/512 (69%), Gaps = 35/512 (7%)
Strand=Plus/Plus
Query 53878 AGCACGGCCGGCTGTGGCTGTTCCTGCATTCCGGTTCACGCGGTGTCGGCAACAAGATCG 53937
|||| | ||| | |||||||||||||| ||||| || ||||| ||||||||||||||||
Sbjct 2 AGCAGGACCGCGTCTGGCTGTTCCTGCACTCCGGCTCCCGCGGCGTCGGCAACAAGATCG 61
Query 53938 CCCAGAAGCACATCAAGATCGCGCAAGCCGAATGCGCCGAGCATGGTG--TCGAACTGCC 53995
||||| | ||||||||| ||||| ||| || ||||| ||||| |||| |||||
Sbjct 62 CCCAGCACCACATCAAGGTCGCG--AGCGACCTGTGCCGACGCTGGTGGATCGACCTGCC 119
Query 53996 CGGCGGCAACAAGGATCTAGCCTACCTCGTCGAGGGCGAACCGTCGTTCGGCGCGTACCT 54055
|| || || || |||||||| || ||||| || ||||| | || ||| |
Sbjct 120 CG------ACCCCGACCTCGCCTACCTGGTGGAGGGGGACGACACGTTCTGGGCCTACAT 173
Query 54056 CGCTGAGCTGCGTTGGGCGCAACAGTTCGCGATGTTCAACCGCAACGAGATGATGGACCG 54115
| ||| |||| ||||| || || ||||| || |||||||| | ||||||||| ||||
Sbjct 174 CCGCGAGATGCGGTGGGCCCAGCACTTCGCCCTGCTCAACCGCGAGGAGATGATGCACCG 233
Query 54116 GTACCGGCAAGCGTTCGCGCACTGGCTCGACATCGGTGTCGACGAGGCGCCAGTCGTCGA 54175
|| | | | ||||| || ||| || |||| | || | | |||
Sbjct 234 CGTCCAGGAGGTCGTCGCGGACGAGCT-------GGGCGCGAC--CGTGCAGGCGGACGA 284
Query 54176 GATCGCCGGCGAACGCGTCAACGCGCACCACAACTACACCACCCAGGAGCACATCAACGG 54235
|| ||| ||||| ||||||||||||||| | |||| | | |||
Sbjct 285 GA-------CGA-----TCAACTGCCACCACAACTACACCGAGCGCGAGCGCGTGTTCGG 332
Query 54236 TGAGCTGGTGTGGGTGACCCGCAAGGGCGCCATC--AGCGCGCAACTCGGTGAGCGTGGC 54293
| |||||||||| ||||||||||||| ||| ||| |||| ||||| || ||
Sbjct 333 TCGCGAGGTGTGGGTGTCCCGCAAGGGCGCGATCCGTGCGGGCAA--GGGTGATCGCGGG 390
Query 54294 CTCATCCCCGGCAGCATGGGCACGGCCTCCTACGTCGTCACCGGTAAAGGCAACCCCGAA 54353
|| ||||||||| ||||||||||| || ||||||||||| || ||| ||||
Sbjct 391 CTGATCCCCGGCTCGATGGGCACGGCGTCGTACGTCGTCACGGGCCTGGGCTACCCGCCG 450
Query 54354 GGGCTGCATTCCGCGCCGCACGGCGCCGGCCG 54385
|||| || || |||||||| ||||||||
Sbjct 451 TCGCTGATGTCGGCCCCGCACGGGGCCGGCCG 482
>seq171065
Length=1298
Score = 134 bits (148), Expect = 6e-27
Identities = 131/169 (78%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 36550 ACCCGTCGCACTACACGTCGCACCCTAGTGGCGTGGAGTGCATCACGATCACCGAGCACA 36609
||||| ||||||| | |||| || || ||||||||||||||| ||||||||||||||
Sbjct 30 ACCCGCAGCACTACGTGACGCATCCCAGCGGCGTGGAGTGCATCGAGATCACCGAGCACA 89
Query 36610 TGGGCTTCAACCTCGGCAACGCCGTCAAATACATCTGGCGCTGCGACCTGAAACGCGACG 36669
|||||| | |||||||||| |||| ||| |||||||| |||| | || |||| |
Sbjct 90 TGGGCTACCTGCTCGGCAACGTGATCAAGTACGTCTGGCGCGCCGACATCAAGGGCGAGG 149
Query 36670 CGATCGAGGATCTGAAAAAGGCCGCGTTCTACGTCGACCGTGAAATCGC 36718
| | ||||| |||| |||||| ||||||| | ||||| || |||||
Sbjct 150 CACTGGAGGACTTGAAGAAGGCCCGGTTCTACCTGGACCGGGAGATCGC 198
>seq74518
Length=2537
Score = 129 bits (142), Expect = 2e-25
Identities = 246/354 (69%), Gaps = 14/354 (4%)
Strand=Plus/Minus
Query 26157 GGCGAGCCGCATCCGAAGATGGCGGTGATGCTCGACGTCGAATCGTGGAACGGGCAGATC 26216
|||| | |||||| | | ||| | ||||||||||||||||||| | |||| | |
Sbjct 1131 GGCGGACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCCGG---CGGGAACCCC 1075
Query 26217 GGCGGTGACCAGTCGGCCGGCATCAACGCTGCGTTCGAGCAGATCGCCGGTTG-GCTGGG 26275
||||| || ||||| | | |||||| | | | | | ||| || | || ||
Sbjct 1074 GGCGGCGATGCGTCGGACTGGATCAACCGCACCTACTGGAACCTCGTCGAATACGCCGGT 1015
Query 26276 CG-ACCGC-CGGCGAGTCATCGGCTACGGCAACACCGGTGACCTCAACGCGTTGTGGCCG 26333
| | ||| ||||| || |||||||||| ||| | | ||| || || | ||||||
Sbjct 1014 GGCAACGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGGCGT 955
Query 26334 ---CGCAAACCTGAAGGTGTGCGGCTGGTCGTCGCCGGTTACGGCAAGCTTCCGA-CCTA 26389
||| || | || |||| || ||| ||||||||||||| ||||| |||
Sbjct 954 GTTCGC---CCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAACCTG 898
Query 26390 TCCGGGCATGATCGCCCACCAATACACCGACGGGCAGGGCTACGGCGGTGGCCTGCCGGA 26449
|||| || |||||| ||||| ||||||||||| | ||| | |||||| || || || ||
Sbjct 897 GCCGGACA-GATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGA 839
Query 26450 AGGCGCGCCGCCGTTCGGGCGGTGCGACATGAACGCCGCAAACGGGCTGACCGC 26503
||| || ||||||||||| |||||||||||| |||| |||| || || ||
Sbjct 838 AGGGGCACCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGGCCTCACGGC 785
>seq47396
Length=7053
Score = 87.8 bits (96), Expect = 7e-13
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 828 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 885
||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 4059 GTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 4116
>seq20617
Length=36039
Score = 82.4 bits (90), Expect = 3e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 36558 CACTACACGTCGCACCCTAGTGGCGTGGAGTGCATCACGATCACCGAGCACATGGGCTTC 36617
|||||||| ||||| | ||||| | ||||||||| ||||||| |||||||| ||||
Sbjct 28218 CACTACACCGCGCACGCCAGTGGGATCGAGTGCATCGAGATCACCAAGCACATGAACTTC 28159
Query 36618 AACCTCGGCAACGCCGTCAAATACATCTGGCGCTGCGACCTGAAACGCGACGCGATCGAG 36677
| | |||||||| | || |||||||||||| | || || ||||| | |||
Sbjct 28158 TGCTTGGGCAACGCGATGAAGTACATCTGGCGCGCTGGGCTCAAGGGCGACAGTGTGGAG 28099
Query 36678 GATCTGAAAAAGGCC 36692
|||||| ||||||
Sbjct 28098 GATCTGCGCAAGGCC 28084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 199713691826586
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