Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq100037 96.9 6e-15
seq116274 93.3 8e-14
>seq100037
Length=1801
Score = 96.9 bits (106), Expect = 6e-15
Identities = 108/143 (76%), Gaps = 6/143 (4%)
Strand=Plus/Minus
Query 182419 CAGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCTTCTGACAAAGAAGAATACGGT 182478
|||||||| ||||||||| | || || ||||||| |||||||| ||| | |||||
Sbjct 277 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 218
Query 182479 GCAAGAACTTTAAGAAAAAAGATATTTGATAAGTTATATGAATATATGACAGAATTTCCT 182538
|||||||| ||||||| || || | ||| ||| |||||||| | ||||||||||||
Sbjct 217 GCAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTTACAGAATTTCCT 158
Query 182539 ---GTTATACGTAAACACCCATA 182558
||||| |||||| || ||
Sbjct 157 CCAGTTAT---TAAACATCCTTA 138
>seq116274
Length=581
Score = 93.3 bits (102), Expect = 8e-14
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 143094 GGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAACCTCTT 143153
|||||||| || |||||| | |||| || ||| |||| ||||| | || || |||
Sbjct 401 GGTATATGTGACAATTTATTGACATGTACAGTCCGAGCGTGGGACTTCTCAAAGCCACTT 342
Query 143154 ATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATCCTATTACAGAAAAACATATA 143213
| || ||||| || ||||| | ||||||||||||||||||||| ||||| |||
Sbjct 341 GTATTCTGTCCTGCAATGAACACTAGAATGTGGGAACATCCTATTACATCTAAACAAATA 282
Query 143214 GATGCTTTAAAACATATGGG-TTTCATAGAAAT 143245
|||| |||||| || ||| ||||| ||||||
Sbjct 281 GATGTTTTAAAGGATTGGGGCTTTCA-AGAAAT 250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 900282201430880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |