Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq13366 199 9e-46
seq26642 122 2e-22
>seq13366
Length=6323
Score = 199 bits (220), Expect = 9e-46
Identities = 433/644 (67%), Gaps = 13/644 (2%)
Strand=Plus/Minus
Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579
|| || || ||| ||| || || || ||| ||||||||||||| |||| || | |||
Sbjct 2114 TCCTGTTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATTTTTGATACTTTAAAA 2055
Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGT----ATTCACGTT-CATGATA 110634
|| ||| | ||||||||| |||| || || ||| || ||| || ||| | |
Sbjct 2054 CAATGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTACATACACATTGCATCAGA 1995
Query 110635 TTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAA 110694
||||| || | | || || | || || | |||| ||| || || ||||
Sbjct 1994 ---GCTCAG--GGTTCTTACATAGCTGGCACTAATGGGGTCTCAAATGGTCTAGTGCCAA 1940
Query 110695 TGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---G 110751
|||| ||||| | ||| | ||||| | |||||| |||||||||| || | | | |
Sbjct 1939 TGTTGAGAGTGTATAACAATACTGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCG 1880
Query 110752 GCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTC 110811
|| ||||||| || ||| | || ||||||||| | ||||||||||||||||| || |
Sbjct 1879 GCGCATTTGCAATTTATTTAGAGCCTTGGCATGCGGATATATTTGAATTCTTGGATTTAA 1820
Query 110812 GTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTT 110871
|| || ||| |||||| ||||| | || | |||||||| | |||||
Sbjct 1819 AGAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATAC 1760
Query 110872 CAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATC 110931
||||| | || |||||| | || || | ||| | ||| ||| ||||||||||||
Sbjct 1759 CAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATG 1700
Query 110932 GTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATG 110991
|| |||||| || |||| | |||| | || |||||||| || || | |||||||
Sbjct 1699 ATTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTATATGCCAAATATG 1640
Query 110992 AAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTG 111051
|| ||||| ||| |||||| | ||||||||| | ||| ||| | |
Sbjct 1639 AAGAAGAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAG 1580
Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111
|| | ||||| || ||||| || || || || |||||||| ||| | ||| | ||
Sbjct 1579 AAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGA 1520
Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155
|||||||| ||| | || || ||||| | ||| ||| | |||
Sbjct 1519 GTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 1476
>seq26642
Length=11175
Score = 122 bits (134), Expect = 2e-22
Identities = 349/520 (67%), Gaps = 34/520 (7%)
Strand=Plus/Minus
Query 304982 CGCATTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041
||| | ||||||||||| || | || |||| ||||| |||||||| || ||||| |||
Sbjct 10170 CGCTTAAAAGGTAAAGAAGGGAGAATCAGAGGAAATCTTATGGGAAAGCGAGTTGACTTT 10111
Query 305042 AGTGCAAGAAGTGTAATCACACCTGATTCTCAAATTA-GTCTTCATGAATTAGGAGTTCC 305100
||| |||| |||||||| |||||| || || ||| || || || || ||||||| ||
Sbjct 10110 TCTGCCAGAACCGTAATCACTCCTGATCCT-AATTTACGTATTGATCAAGTAGGAGTGCC 10052
Query 305101 AATTGAAATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA-ACGAGAAAAATATTAAAC 305159
|||||| ||| ||||||| ||||| ||| | || | || ||| | |
Sbjct 10051 TCGCTCTATTGCTCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAA-TATAGACC 9993
Query 305160 ATTTG-AGACGTTGTGTTCTTAATGGAAATAGCA-AGTATCCAGGTGCTCGTGCTGTTAT 305217
|| || |||| |||| || |||||| ||| ||||||||||||| |||
Sbjct 9992 GAATGCAGGAGTTG-GTTCGTAGGGGAAAT-GCACAGTATCCAGGTGCAAAG-----TAT 9940
Query 305218 AAAACACAAGCAAAAGAAGACA--ATATCTTTGAACCATATCGATTTAAAACAATTCAGT 305275
| | | || || | ||| | ||| | ||| | || || ||||| || |||
Sbjct 9939 ATAGTCCGAGATAATGGAGAAAGAATAGATCTGAGG--TTTC-ATCCAAAACCAT-CAG- 9885
Query 305276 AAAATGCTTGAAATTAATGATATTGTTATCA--------GACATTTGAATGACAATGATT 305327
|| ||| | ||| |||| |||| | | || |||| || | ||||
Sbjct 9884 ---AT--TTGCATTTACA-ATATGGTTACAAAGTGGAGCGTCACTTGAGAGATGACGATT 9831
Query 305328 GGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCA 305387
|||| | |||||| | || ||| | |||| |||||| |||||||| ||| | || |
Sbjct 9830 TGGTTATTTTCAATCGACAGCCAACTTTGCACAAAATGAGTATGATGGGTCACAGGGTGA 9771
Query 305388 AAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGG 305447
||||||| | | | |||||||| | ||| | ||| | |||| || ||||| |
Sbjct 9770 AAGTATTGCCGTGGTCTACATTTCGTATGAATTTGAGTTGCACTTCGCCATACAATGCTG 9711
Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
||||||| || || ||||||||| | ||||||||||||||
Sbjct 9710 ATTTTGACGGCGACGAAATGAATTTACATGTACCTCAATC 9671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1182599465095763
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |