Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq28654 125 5e-24
seq133356 91.5 1e-13
seq27511 82.4 5e-11
seq21024 82.4 5e-11
>seq28654
Length=3315
Score = 125 bits (138), Expect = 5e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| || ||||| || ||||| |||||||| || || || || ||
Sbjct 2388 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 2447
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| |||||| |||| |||||||| ||||| || ||||||||||| || |||||| | ||
Sbjct 2448 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 2507
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| |||||| | || |||| || | || ||| | ||| ||
Sbjct 2508 ATGCCTTCCTTGTCTTGAATTTT-GGCTTTTACATTTTCAATAGTATCGGAAGGTTCAAC 2566
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || |||||||| || | ||||| ||||||||||||||
Sbjct 2567 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 2614
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||| |||||||| ||||| || | |||| |||||| || || || || || ||
Sbjct 791 ACCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGA 850
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || || | || |||| || || || || ||||| | ||| || |||||| | ||
Sbjct 851 GAGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGG 910
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| ||| |||||||| || || ||| ||||| ||| ||||| | ||| |
Sbjct 911 AATACCCTCTTTGTCTTGGATCTTAGCTTT-AACATTTTCAATAGTGTCTGAGGGTTCAA 969
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| ||||| ||||| | || ||||||||||||||||||
Sbjct 970 CTTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCATA 1019
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||| || ||| | || | ||| || || ||| ||||| |||||||| || ||
Sbjct 1703 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 1762
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| | || |||||||| || || ||||| || | |||||||||||| | ||
Sbjct 1763 GAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 1822
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || |||||||| ||||| | || |||| || | || || | |||||
Sbjct 1823 GATGCCCTCTTTGTCTTGGATTTT-AGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 1881
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || || |||| ||||| ||||| |||||||||
Sbjct 1882 CTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 1931
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| ||||| | || || || | ||| |||||||| |||||||| || ||
Sbjct 1931 ACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 1990
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||||| || | || || ||||| || || |||||||| | ||| || ||||| | ||
Sbjct 1991 CAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGG 2050
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||||| ||||| |||| |||| || | ||||| | ||| |
Sbjct 2051 AATGCCTTCTTTGTCTTGGATTTTAGCTTTC-ACATTTTCAATTGTGTCAGAAGCTTCAA 2109
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || ||||| || || | ||||| |||||||| ||||||
Sbjct 2110 CTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 2159
Score = 95.1 bits (104), Expect = 8e-15
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594
|| || || |||||||| || || ||||| || || ||||| || | ||| || |
Sbjct 2172 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 2231
Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654
|| |||| ||||||||| |||||||| | | ||| |||||| | || | ||| ||||||
Sbjct 2232 TCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 2291
Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713
|| || || |||| ||| || | |||||| | || || || | |||||
Sbjct 2292 TCTTGGATCTTTGCCTTCA-CATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGAT 2350
Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||| ||||| | || || ||||||||||||||
Sbjct 2351 GGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 2386
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | || ||||| | ||| |||||||| ||||| || || ||
Sbjct 564 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 623
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || || || ||||| || ||||| || | |||||| || ||| | ||
Sbjct 624 AGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 683
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || || ||||| || | |||||| || |||||
Sbjct 684 ATGCCCTCCTTGTCTTGGATCTTAGCCTT-AACATTTTCGATAGTGTCGGATGGCTCCAC 742
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| || || || || | || || |||||||||||||||
Sbjct 743 CTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCATA 791
>seq133356
Length=434
Score = 91.5 bits (100), Expect = 1e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 70291 TTTTTAACACCCGAAACAATGGCCAGATGTGGATTTTATTATTTGAAACGAGGTGATGAA 70350
|||||| ||||||| || | || || ||| || |||||| || || || ||||||
Sbjct 251 TTTTTATTACCCGAATCACTCGCGAGGAATGGCTTCTATTATCTGGGCCGCGGCGATGAA 192
Query 70351 GTTAGATGTGCCTATTGTAAAGTGGAAATAATGCAATGGAAAGAGGGTGATGATCCATCC 70410
|| | || || | ||||||||| ||||| ||| ||||| | ||| || ||||| ||
Sbjct 191 GTACGCTGCGCGTTTTGTAAAGTAGAAATTATGAAATGGGTTGCGGGCGACGATCCCGCC 132
Query 70411 GCCGACCACAAGCGATGGGCGCCTCAATGC 70440
|||||| |||| ||||||||||| |||
Sbjct 131 AAGGACCACCAGCGCTGGGCGCCTCAGTGC 102
>seq27511
Length=800
Score = 82.4 bits (90), Expect = 5e-11
Identities = 112/155 (72%), Gaps = 1/155 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|||||||||| |||| || | || | ||| ||||| || ||||||||||| ||
Sbjct 215 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 156
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
||||||||| | || || | || ||||| |||||||| | | ||||||||| | ||
Sbjct 155 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 96
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677
| || ||||| || |||||| || || |||||
Sbjct 95 ATTCCCTCTTTATCCTGAATTTT-TGCTTTAACAT 62
>seq21024
Length=8359
Score = 82.4 bits (90), Expect = 5e-11
Identities = 80/103 (78%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||| | || | ||| || ||||| ||| || ||||| |||||||| ||||
Sbjct 2851 CACCACCTCGGAGTCGGAGCACTAAGTGTAGTGTGGATTCCTTTTGAATGTTGTAGTCGG 2792
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAA 33623
|||| || || | || ||||||||||| |||||||| |||||
Sbjct 2791 AGAGGGTTCGGCCATCTTCCAATTGTTTACCGGCAAAGATCAA 2749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 327593983335360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |