Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq76306 145 2e-29
seq27511 138 3e-27
seq28654 123 6e-23
>seq76306
Length=316
Score = 145 bits (160), Expect = 2e-29
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || ||||| ||||| |||||||||||| |||||| ||| |||||
Sbjct 72 AAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTGATACAATCGAAAAC 131
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| |||||||||||| || ||||| ||| || || |||||||| || |||
Sbjct 132 GTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAACAAAGACTGATTTTC 191
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||||||||| |||||||||| | || ||| | || || || ||||||| || |||
Sbjct 192 GCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATATCCAGAAGGAATCT 251
Query 206365 ACTCTTCACCTTGTTTTG 206382
||| | ||| | ||||||
Sbjct 252 ACTTTGCACTTAGTTTTG 269
Score = 95.1 bits (104), Expect = 3e-14
Identities = 79/97 (81%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 204760 CAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATC 204819
|||||| | ||| | |||||| || ||||||| ||||||||| | ||| || | |||||
Sbjct 269 CAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATC 210
Query 204820 TTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||| |||||||||||||| || || | |||||||
Sbjct 209 TTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGA 173
>seq27511
Length=800
Score = 138 bits (152), Expect = 3e-27
Identities = 149/196 (76%), Gaps = 1/196 (1%)
Strand=Plus/Plus
Query 206179 TTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || || || || ||||| |||||||||||||||||| |||||| ||| |
Sbjct 225 TTTTGTAAAGACACTGACTGGCAAAACTATCACTTTGGAAGTGGAAGCTTCTGATACAAT 284
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
||| || ||| |||||||||||| |||||||| ||| || ||| || || ||
Sbjct 285 AGAAAATGTTAAGGCAAAGATTCAAGACAAAGAAGGCATTCCTCCTGACCAACAGAGGCT 344
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||| || || ||||| ||| ||||||||||| | || ||| | ||||| || | |||||
Sbjct 345 TATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACATTGTCAGATTATAATATTCAGAA 404
Query 206358 AGAGTCTACTCTTCAC 206373
|| |||||| | |||
Sbjct 405 GGAATCTACTTTGCAC 420
Score = 129 bits (142), Expect = 1e-24
Identities = 147/195 (75%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || |||||||||||||| || |||||| ||| | |||
Sbjct 4 AAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCTGATACAATTGAAAAT 63
Query 206245 G-TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
| |||||||||| ||||| || ||||| |||||| || || ||||||||||| ||
Sbjct 64 GTTAAAGCAAAA-ATTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAAAGACTTATTTT 122
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| ||||||||| | ||||||||| | || | | ||||||||| | |||||||| ||
Sbjct 123 TGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGATTACAACATTCAGAAAGAATC 182
Query 206364 TACTCTTCACCTTGT 206378
|||| | ||||| ||
Sbjct 183 TACTTTGCACCTAGT 197
Score = 111 bits (122), Expect = 4e-19
Identities = 146/201 (73%), Gaps = 1/201 (0%)
Strand=Plus/Plus
Query 206179 TTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || || || || || || |||||||||||||||||| |||||| ||| |
Sbjct 453 TTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTCTGATACAAT 512
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
||| || ||| || ||||| || ||||| || ||| || || ||||||||
Sbjct 513 TGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCAGCAAAGACT 572
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||| || || ||||||||| | ||||||||| | || | | || ||||| | |||||
Sbjct 573 TATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACAATATTCAGAA 632
Query 206358 AGAGTCTACTCTTCACCTTGT 206378
|| || ||| | ||||| ||
Sbjct 633 GGAATCAACTTTGCACCTGGT 653
>seq28654
Length=3315
Score = 123 bits (136), Expect = 6e-23
Identities = 150/202 (74%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| |||||| || || |||||||| || ||||||||||| || || |||
Sbjct 1243 CAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATCAGAC 1184
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || ||||| || ||||||||| || ||||||||| || || ||
Sbjct 1183 ACCATTGAAAATGTTAAAGCTAA-GATTCAAGATAAGGAAGGAATTCCTCCAGATCAACA 1125
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | ||||||||||| || || || |||||||||| | || || | || ||||| |
Sbjct 1124 ACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTACAATAT 1065
Query 206352 CCAGAAAGAGTCTACTCTTCAC 206373
|||||||||||| || ||||||
Sbjct 1064 CCAGAAAGAGTCGACCCTTCAC 1043
Score = 118 bits (130), Expect = 2e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| ||| || || ||||| || || || ||| |||| ||||| ||||||
Sbjct 1699 CAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCTGAC 1640
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | ||| |||||| ||||||||||| ||||| || ||| || || |||
Sbjct 1639 ACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAACAA 1580
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||| || || |||||| | |||||||| | || || | || |||||| ||
Sbjct 1579 CGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAACATC 1520
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
|| ||||||||||| |||||
Sbjct 1519 CAAAAAGAGTCTACCCTTCA 1500
Score = 114 bits (126), Expect = 3e-20
Identities = 164/228 (72%), Gaps = 5/228 (2%)
Strand=Plus/Minus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| ||| ||||| || || || ||||| || ||||||||||| |||
Sbjct 2617 AAAATG---CAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAA 2561
Query 206224 AGTTCTGACACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282
||| || || | ||| ||||| || ||| |||||||| || ||||| ||| ||
Sbjct 2560 CCTTCCGATACTATTGAAAATGTAAAAGCCAAA-ATTCAAGACAAGGAAGGCATTCCTCC 2502
Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342
|| ||| | | || ||||| |||||||| |||||||| ||| | ||| | | ||
Sbjct 2501 AGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGA 2442
Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|| || | || ||||| |||||||||||| | || ||| | |||||
Sbjct 2441 CTATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCG 2394
Score = 100 bits (110), Expect = 7e-16
Identities = 145/202 (72%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| |||||| | || ||||| || || || ||||||| ||| ||||||
Sbjct 1471 CAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCTGAC 1412
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
||| |||| || ||||| ||| || || || || || || || || ||| ||
Sbjct 1411 ACAATCGAGAATGTCAAAGCTAAA-ATACAGGATAAGGAGGGCATCCCCCCAGACCAACA 1353
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| || || || || |||||||| ||||||||||| | |||||| | |||||||| |
Sbjct 1352 GCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAATAT 1293
Query 206352 CCAGAAAGAGTCTACTCTTCAC 206373
||||||||||| || || |||
Sbjct 1292 TCAGAAAGAGTCAACCCTGCAC 1271
Score = 96.9 bits (106), Expect = 8e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| || || ||||| || || || ||||||||||| |||||
Sbjct 1927 CAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCTGAT 1868
Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| ||||| || ||| || ||||| ||||| || || || || ||
Sbjct 1867 ACTATTGAAAATGTAAAAGCTAAA-ATCCAAGACAAAGAGGGCATCCCACCTGATCAGCA 1809
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| |||||||| || || ||||| ||||||||||| | || | | || |||||| |
Sbjct 1808 GCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTCTCTGACTACAACAT 1749
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||| || |||||||| ||||| || || || | || |||
Sbjct 1748 CCAAAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGA 1709
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || ||||||||||| |||||||| || || || || |||
Sbjct 2383 CAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTCCGAC 2324
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| ||||| || ||| |||||| ||||| ||||| || ||| || || ||
Sbjct 2323 ACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAG 2264
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| ||||| || || ||||| || |||||||||| | || || | ||||| || |
Sbjct 2263 AGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATATT 2204
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|| || || ||||| || || | || ||| | |||||
Sbjct 2203 CAAAAGGAATCTACCCTACATTTAGTATTGCGGCTTCG 2166
Score = 91.5 bits (100), Expect = 3e-13
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828
|||||| || ||||||||||||| ||| ||||||| || || | ||||||||||| ||
Sbjct 1043 GTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGTTG 1102
Query 204829 CTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|| || ||||||||||| |||||||||
Sbjct 1103 TTTACCAGCGAAGATAAGACGTTGTTGA 1130
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||| | ||| || | |||||||||||| ||||| || | ||||||||||| | |||
Sbjct 2394 CGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTG 2453
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| ||| ||||||| |||||||| ||||| || | |||||||||
Sbjct 2454 CGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGA 2498
Score = 87.8 bits (96), Expect = 4e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || ||||| ||||| ||||| || ||||| ||| || |||
Sbjct 1015 CAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCAGAC 956
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || ||||| || ||| ||||| ||||| || ||| || || ||
Sbjct 955 ACTATTGAAAATGTTAAAGCTAA-GATCCAAGACAAAGAGGGTATTCCCCCAGATCAACA 897
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | || || ||||| || |||||| |||| ||||| | ||| | | || || || |
Sbjct 896 ACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTATAATAT 837
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTT 206381
||||||||||| ||| | ||| | || ||
Sbjct 836 TCAGAAAGAGTCCACTTTGCACTTGGTATT 807
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || || || || || ||||||||||| ||||| || |||
Sbjct 787 CAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCCGAC 728
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| ||||| || ||| ||||| ||||| || || || ||| || ||| ||
Sbjct 727 ACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAACAG 668
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || || ||||| || ||||| | ||| || | || || ||| ||
Sbjct 667 CGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAACATC 608
Query 206353 CAGAAAGAGTCTACT 206367
|| ||||| ||||||
Sbjct 607 CAAAAAGAATCTACT 593
Score = 86.0 bits (94), Expect = 1e-11
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 204770 TGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 204829
||||| ||||||||||| |||| || ||||||| || || | |||||||| ||||||
Sbjct 1500 TGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCTAGCTGC 1559
Query 204830 TTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|| || || |||||||| |||||||||
Sbjct 1560 TTGCCAGCAAAGATAAGACGTTGTTGA 1586
Score = 84.2 bits (92), Expect = 5e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 204761 AAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCT 204820
|| || | ||| | ||| ||||||||||| | ||||||||||| | ||| | |||||
Sbjct 807 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGAGTACGGCCATCC 866
Query 204821 TCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||||||||||| || ||||| || || |||||||||
Sbjct 867 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGA 902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177625187324443
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |