Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq61277 132 5e-26 seq243462 98.7 1e-15 seq256480 91.5 1e-13 seq76033 91.5 1e-13 seq263246 84.2 2e-11 >seq61277 Length=456 Score = 132 bits (146), Expect = 5e-26 Identities = 189/261 (72%), Gaps = 9/261 (3%) Strand=Plus/Plus Query 142549 TCTCGTCGTCACATCGTCACCGCGTGGAACC-CTGCTGAAGTCGACGACATGGCACTTCC 142607 || ||||| |||||||| | ||||||||| | || || ||| | |||||||| || || Sbjct 166 TCCCGTCGGCACATCGTGTCGGCGTGGAACGTCAGC-GAGGTCAAGGACATGGCGCTACC 224 Query 142608 TCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAG--AAGCGTCTGTCATGCCAG 142665 ||||| ||| | ||||||| ||| |||||| | || | |||| | || |||||| Sbjct 225 GCCGTGCCACTCGCTGTTCCAGTTCTACGTCGCC--GACGGCAAGC---TCTCGTGCCAG 279 Query 142666 CTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCG 142725 ||||| || || ||||| ||| |||||||| || ||||||||||| || || ||||| Sbjct 280 CTGTACCAACGCTCGGCGGACGTCTTCCTCGGGGTGCCGTTCAACATCGCGTCCTACGCC 339 Query 142726 CTTCTCACACAGCTCATTGCTCGCGAATGCGGTCTGGAACTCGGAGACTTCGTCCACACC 142785 || || || || | || | | ||||||| ||| || |||||| |||||||| Sbjct 340 CTGCTGGTGCACCTGGTCGCCCAGGTGGTCGGTCTGCAACCGGGCGACTTCATCCACACC 399 Query 142786 TTCGGCAATTCGCACATCTAC 142806 | ||| || ||||| | ||| Sbjct 400 CTGGGCGATGCGCACCTGTAC 420 >seq243462 Length=264 Score = 98.7 bits (108), Expect = 1e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 ||||| || |||||||| ||| | ||| | | || || || || || ||||||||||| Sbjct 168 TTCGGGCACCAGATGCGGTTCGACCTGTCGGAGGGGTTCCCGCTGGTCACCACGAAGAAG 109 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 |||| ||| |||| | |||||||| || ||||||||||| ||||| || ||| || Sbjct 108 GTGCACCTGCGGTCGGTGATCGTCGAGCTGCTGTGGTTCCTGCGCGGCGAGACCAACGTC 49 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGA 142409 | || || || | | ||| | ||||||||| |||||||| || Sbjct 48 CGCTGGCTGCAGGAGCGCGGCGTGACGATCTGGGACGAATGGGCGGA 2 >seq256480 Length=539 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 142315 TCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATCAAGTATCTTCAC 142374 ||||||||||||||||| ||||||||||| ||||| || || || | || || Sbjct 180 TCGATCATCGTCGAACTGCTGTGGTTCCTGCGCGGCGACACCAATGTCCGCTGGCTGCAG 121 Query 142375 GATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAACCTCGGACCTGTC 142434 || | ||| ||| ||||||||| |||||||| || | ||| | ||||| || ||| Sbjct 120 GAGCGCAAGGTCGCGATCTGGGACGAATGGGCGGACGAGGCGGGCGATCTCGGCCCGGTC 61 Query 142435 TACGGCAAGCAGTGG 142449 ||||||||||| ||| Sbjct 60 TACGGCAAGCAATGG 46 >seq76033 Length=7108 Score = 91.5 bits (100), Expect = 1e-13 Identities = 186/272 (68%), Gaps = 7/272 (3%) Strand=Plus/Plus Query 142547 ATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTC 142606 |||| || || |||||||| |||| |||||| | || || | ||||| | | Sbjct 6263 ATTCGCGGCGCAACATCGTCTCCGCCTGGAACGTGGGGGAGATCCCGCAGATGGCGTTGC 6322 Query 142607 CTCCGTGTCACATGATGTTCCAATTCCACGTCGACT-CGAAGAAGCGTCTGTCATGCCAG 142665 | ||||| ||| | ||||| ||| |||||| | || | || || || |||||| Sbjct 6323 CGCCGTGCCACGCCTTCTTCCAGTTCTACGTCGCCGACGGAAAA----CTCTCCTGCCAG 6378 Query 142666 CTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCG 142725 || |||||||| || ||| ||||||||| || ||||||||||| || || || || Sbjct 6379 CTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATCGCGTCCTATGCC 6438 Query 142726 CTTCTCACACAGCTCATTGCTCGCGAATG-CGGTCTGGAACTCGGAGACTTCGTCCACAC 142784 || ||||| || | || || |||| | | ||| || || |||| || ||||| || Sbjct 6439 CTGCTCACCCACATGATGGC-CGCGCAGGCCGGCCTCGAGGTCGGTGAGTTCGTGTGGAC 6497 Query 142785 CTTCGGCAATTCGCACATCTACGATACACACG 142816 | ||| | | ||||||||||| | |||| Sbjct 6498 CGGCGGGGACTGCCACATCTACGACAACCACG 6529 >seq263246 Length=351 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 142252 CAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAGCTGCATCTG 142311 |||||||| ||| |||| || || ||||| || | ||| |||| |||||||| || || Sbjct 224 CAGATGCGGTTCGATCTCGCGCAGGGCTTCCCCGTGCTCACCACCAAGAAGCTCCACCTC 283 Query 142312 AAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 ||||||||| ||||||| ||||||||||| ||||| || ||| || Sbjct 284 CGCTCGATCATCATCGAACTGCTGTGGTTCCTGCGCGGCGACACCAACGTC 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498765702252080