Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq97465 104 7e-19 seq75111 102 3e-18 seq57609 96.9 1e-16 >seq97465 Length=2231 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 2184 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 2125 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2124 CCGGGTTTCGGC 2113 >seq75111 Length=3990 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 953 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 1012 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 1013 TCCCGGGTTTCGGC 1026 >seq57609 Length=2238 Score = 96.9 bits (106), Expect = 1e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || || || ||| || ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2160 TTCATAGCCGAAATAACTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGT 2219 Query 2823 TCAACCCCGGGCTTCAGC 2840 || | |||||| ||| || Sbjct 2220 TCGATCCCGGGTTTCGGC 2237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15801566276535