Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq10526 354 7e-93
seq28654 98.7 9e-16
seq27511 95.1 1e-14
>seq10526
Length=5062
Score = 354 bits (392), Expect = 7e-93
Identities = 925/1390 (67%), Gaps = 42/1390 (3%)
Strand=Plus/Minus
Query 59754 TCTAAAGGCGGTCGATATAAAAATGACCGTCAAACTATGTAATTCGGACGGATGCACTTC 59813
|| ||||| || |||| ||| |||| || | || || ||| ||||| |||| |||
Sbjct 4297 TCGAAAGGTGGAAGATACCAAA-TGACAGTGGAGCTTTGCAATGAAGACGGCTGCAGTTC 4239
Query 59814 GAGTCAGCCGGTCGATGTTGTCATTGCAGATACCGACGGCTCTCATCTCGCTCCGTTATA 59873
||| | || ||| ||||| | || |||||||| || |||| | |||| | |
Sbjct 4238 AAGTGATCCCACCGAAATTGTCGTGGCCGATACCGATGGAAGTCATTTACCTCCTCTGGA 4179
Query 59874 TTATGAATATCAAGAACTGAACCAGCCCTTCGAAAGTCGAGTAGTGGATAAAGTCGTTGC 59933
||| || |||| || |||| ||| ||| | |||| ||||| || |
Sbjct 4178 ATATACATTGGGAGAAAAAAATAAGCCGTTC--AAGCAAACATCTGGA-AAAGTTGTGGG 4122
Query 59934 CGCATATTTTGTCGAATGGGGTGTTTATCCTAGAAATTTTCCTGTAGATCGAGTGCCCAC 59993
|| || || || ||||||||||| |||||||| || || || || ||||| | || |
Sbjct 4121 TGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTAT 4062
Query 59994 TCCTAATCTATCGCATATTCTATACGGATTTATTCCGATATGCGGCGGCGACGGTATCAA 60053
|||||||| | ||| | || ||||| |||||||| || |||||||| ||||| || ||
Sbjct 4061 ACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATTAA 4002
Query 60054 CGACAGTCTTAAAACCATAACCGGTAGTTTCGAAGCGCTTCAGCGATCGTGTTCAGGTCG 60113
|| ||| | ||| || || |||||| |||| || |||||||| ||| || ||
Sbjct 4001 TGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCG 3942
Query 60114 AGACGACTTTAAAGTATCAATTCACGATCCATGGGCCGCCGTCCAGAAACCCCAAAAACA 60173
|| ||||| ||||| ||||| |||||||||||||| || | || ||||| ||||||
Sbjct 3941 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 3882
Query 60174 AGTAACCGCTTGGAACGAACCATACAAAGGTAATTTCGGACAATTAATGGCAGCCAAACT 60233
| | | | |||||||| || |||||||| || || || ||||||||| || ||||
Sbjct 3881 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACA 3822
Query 60234 GGCAAATCCCCACATCAAAGTGTTGCCCTCGATCGGAGGTTGGACTCTATCCGATCCGTT 60293
|| || | | || | | ||||| || || || ||||| || ||||||| ||
Sbjct 3821 AGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCTTT 3762
Query 60294 CTTTTACTTTCACGATACGGATAAACGA--AAGATTTTTGTAGATTCTGTCGTGGAGTTT 60351
||| | || || | ||| || | ||||| || || || || |||||||
Sbjct 3761 CTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAG--TCAGTAAAGGAGTTT 3704
Query 60352 CTACAGACGTGGAAATTTTTCGACGGTGTCGACATCGACTGGGAGTTTCCCGGCGGAAAA 60411
|| | || |||||||| ||||| ||||| || ||||| |||||||| || || || |||
Sbjct 3703 CTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAA 3644
Query 60412 GGTGCCAATCCCAACGTAGGCGACGCCGAACGCGATCGCGAAACGTACACCATTCTGTTG 60471
||||| || || || | || | | ||| ||| | || || | | || ||
Sbjct 3643 GGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTGTTATGTAAGTTTGATG 3587
Query 60472 AAAGATTTACGCGAGGCGCTAGATCGATTAACCCTC-GAAACGAATCGAACG---TACGA 60527
||||| ||||| ||| || ||||| | | ||| | | |||| | | | |||||
Sbjct 3586 AAAGAATTACGTGAGATGC----TCGATGAGCTCTCTGCTAAGAATGGTAAGAAATACGA 3531
Query 60528 GTTGACCAGCGCAATTAGCGCCGGCGATGACAAAATCGCCGTCGTCGACTACACCGCTGC 60587
|| || || |||||||| || || |||||| || || ||||| ||
Sbjct 3530 ATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTGACTATGGTAAGGC 3471
Query 60588 TCAAGAATATTTAGATTTAAtttttttGATGACGTACGATTTTAAAGGAGCCTGGTCGAA 60647
|||| | ||| | ||| ||||| ||||||| ||||| || || ||||||||||| ||
Sbjct 3470 TCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAA 3411
Query 60648 TAACGATCTGGGCTATCAGACTACTCTATACGCTCCTTCGTTTAATCCTAAAGAACATTA 60707
| | ||| || |||| || | | ||||| ||| ||| ||||| || ||| |||
Sbjct 3410 TGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACTTA 3351
Query 60708 TACTACCGATTTTGCCGT-TCGTGCTCTACTCAAGCAAAAAGTCGAGAATaaaaaaaTTA 60766
|| | || |||| || | || | || ||| ||| | ||| || |||
Sbjct 3350 CACATCTGACTTTGGAGTAAAATACT-TGCTGGCGCAGGGAGTGAATCCTAAGAAGATTG 3292
Query 60767 TTGTCGGCGTGGCCATGTACGGTCGCGGCTGGACCGGCGTAAGCGATTTTGTTGACGATA 60826
| || || || || ||||| ||||| |||||||| ||||| |||| || || |
Sbjct 3291 TAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTTCATGATT---ACGAAGACA 3235
Query 60827 ATAATCCATTTTCCGGAACGGCCAAGGGACCGGTCAAAGGAACATGGGAAGACGGAGTCG 60886
| | ||| || | || | || | ||||| ||||||||||| ||| |||||||||| |
Sbjct 3234 ACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTGG 3175
Query 60887 TCGACTATAGAGAGATTTTCAAT-AATTTCGTC--GCCAATAACCCGATGGAAT---ATT 60940
| ||||| || |||||| ||| || || || | ||| | ||| | |||
Sbjct 3174 TTGACTACAGGGAGATTGCGAATGAAATTGCTCAAGGCAA------GTGGGAGTTCCATT 3121
Query 60941 ACGATTCCGTTGCAAAAGCGGCGTACGTCTTTAATAAC-TCGACCGGCGAGCTCATCACT 60999
|||| || || |||| | || || ||| | | | || || || || || | ||
Sbjct 3120 ACGACAATGTCGCCCAAGCCCCCTATGT-TTTCAGACCATCAACTGGAGATCTTGTAACC 3062
Query 61000 TACGACAATCCTCGGTCGGTTCTGGATAAAGCAAAATATGTATTGGACTA--TAGCTTGG 61057
|| || ||| || | || ||| | || || | ||||||||| | | || ||| | |
Sbjct 3061 TATGATAATGCTAGATCTGTTATTGAAAAGGGTAAATATGTA-AGAAATAACAAGC-TAG 3004
Query 61058 GTGGTTTGTTCGCTTGGGAGATCGACGCCGACAACGGATTACTTCTAAACGCCATGAACA 61117
||||| | || |||||||| | ||||| || || || || || || ||||||||||
Sbjct 3003 GTGGTCTCTTTGCTTGGGAAGTGGACGCTGATAATGGTGACCTACTGAATGCCATGAACA 2944
Query 61118 GCGGTCTCGG 61127
||||||||
Sbjct 2943 TGGGTCTCGG 2934
>seq28654
Length=3315
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | |||||||| ||| | || || ||| | ||||| | ||||| ||| ||
Sbjct 1018 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 959
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| || || || ||||||||||| || || |||||
Sbjct 958 GACACTATTGAAAATGTTAAAGCTAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 899
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| | ||||||| || ||||| || || || |||| | | | || || || |||
Sbjct 898 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTATAAT 839
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||| ||||| ||||| | || || || ||| | || |||||||
Sbjct 838 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 792
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| |||||||| || ||||| | || || | ||||| ||| ||| |
Sbjct 1474 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAA-CCATC 1416
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || |||||| | || ||| ||||| ||||| ||||| || || || || ||
Sbjct 1415 TGACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCA 1356
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|| | ||||||| | || || ||| | ||||||| | | | | | ||||||||
Sbjct 1355 ACAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAA 1296
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTG 25384
|||||| ||||| || ||| | || ||||||
Sbjct 1295 TATTCAGAAAGAGTCAACCCTGCACTTAGTG 1265
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || | || |||||| | ||||| | || || || | |
Sbjct 2386 ATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTCC 2327
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| |||||||| | || || ||| || || ||||||||||| || || |||||
Sbjct 2326 GACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 2267
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| || || |||| | || |||||||| ||||||| | | | ||||| |||
Sbjct 2266 CAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAAT 2207
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
|||||||| ||||| ||| | |||||||| ||
Sbjct 2206 ATTCAAAAGGAATCTACCCTACATTTAGTATT 2175
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| || ||| |||| || || | || || | || || || |||| |
Sbjct 1702 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGA-GCCATC 1644
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || || || | ||||| || ||| |||||||||||||| || || |||||
Sbjct 1643 TGACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCA 1584
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTAC 25351
||| | || || | | ||||| || || ||||||| | | | |||| || |||
Sbjct 1583 ACAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTC--TGACTAC 1526
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGT 25383
|| || |||||||| || ||| ||||||||||
Sbjct 1525 AACATCCAAAAAGAGTCTACCCTTCATTTAGT 1494
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| |||||| | || |||||| | || || | ||||| |||||
Sbjct 2158 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 2099
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || ||| ||||| || ||||| || || || || |||||
Sbjct 2098 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 2039
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
||| | || |||| | ||||| ||| | ||||||| | | | |||| | | ||||
Sbjct 2038 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTG--ACTACA 1981
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || ||||||||||| || | || ||||| | | || ||||| ||
Sbjct 1980 ACATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGG 1932
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | ||||| |||||| | || || ||| | || || | ||||| ||| |
Sbjct 2618 CAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACC 2559
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
||||||||| || | |||||| |||||| || || || || || || || ||
Sbjct 2558 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGA 2499
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
||| ||| | | |||| || || || ||| | ||||| | | | | | || ||
Sbjct 2498 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTA 2439
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
||||||||||||||||| || |||| || || ||
Sbjct 2438 TAATATTCAAAAAGAATCTACTCTTCACTTGGTATT 2403
>seq27511
Length=800
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | |||||||| ||| | || || || | ||||| | ||||| |||||
Sbjct 445 ATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTCT 504
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| || || | || || |||||| |||||||||||||| || || ||||||
Sbjct 505 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCAG 564
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||||| |||| | || || || || ||||||| | | | || ||||||
Sbjct 565 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACAAT 624
Query 25355 ATTCAAAAAGAATCCAC 25371
||||| || ||||| ||
Sbjct 625 ATTCAGAAGGAATCAAC 641
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 25187 GTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC-GATACTATCGA 25245
||||| ||| | || || || | ||||| | ||||| || ||| | ||||| || ||
Sbjct 1 GTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGA-GCCTTCTGATACAATTGA 59
Query 25246 GCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCAT 25305
| || ||| ||||||| ||||||||||| || || || |||||||||||||| ||
Sbjct 60 AAATGTTAAAGCAAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAAAGACTTAT 119
Query 25306 TTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGA 25365
|| | || || || || ||||||| | | | |||||||| ||||| |||||
Sbjct 120 TTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGATTACAACATTCAGAAAGA 179
Query 25366 ATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
||| || | || |||| || | ||||||| ||||
Sbjct 180 ATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGAA 217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 443552798854560
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