Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq61277 170 2e-37 seq263247 122 1e-22 seq76033 120 4e-22 >seq61277 Length=456 Score = 170 bits (188), Expect = 2e-37 Identities = 172/224 (77%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| | ||||||| ||| | |||||| || ||||||||||| | ||||| ||||| | Sbjct 436 GCTCGAGGTGGTTGGAGTACAGGTGCGCATCGCCCAGGGTGTGGATGAAGTCGCCCGGTT 377 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 || ||| ||| ||||| |||| || ||||| | |||| || |||||||| | Sbjct 376 GCAGACCGACCACCTGGGCGACCAGGTGCACCAGCAGGGCGTAGGACGCGATGTTGAACG 317 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | ||||| ||| | |||| |||| | |||||||||||||||||||||| ||||||| Sbjct 316 GCACCCCGAGGAAGACGTCCGCCGAGCGTTGGTACAGCTGGCACGAGAGCTTGCCGTCGG 257 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 | ||||| |||||| |||| |||||||||||| ||||||||| Sbjct 256 CGACGTAGAACTGGAACAGCGAGTGGCACGGCGGTAGCGCCATG 213 >seq263247 Length=570 Score = 122 bits (134), Expect = 1e-22 Identities = 127/167 (76%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 147007 ATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCC 147066 |||| ||||||||||| ||||||||| |||||||| || || || ||| ||||| ||| Sbjct 262 ATGTGGGTGAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGAAGATGTCGCCC 321 Query 147067 GACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATG 147126 || | |||||| |||||| ||| |||| |||| || |||| |||| ||||| Sbjct 322 GAGCGCTGGTAGAGCTGGAGCGACAGCTTGCCGTTCGCGACGTGCGTCTGGAACAGGCAA 381 Query 147127 TGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGC 147173 ||||| || | |||||||| ||| ||||||| |||| ||||| || Sbjct 382 TGGCAGGGTGCGAGCGCCATCGCGTGCAGGTCGCCGGGATTCCATGC 428 >seq76033 Length=7108 Score = 120 bits (132), Expect = 4e-22 Identities = 192/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 146908 AGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGC 146967 ||||| | | ||| | || ||||||||| ||||| ||| |||||| ||| | Sbjct 6551 AGCTGCAATCTCACCTGGTCGACGTGGTTGTCGTAGATGTGGCAGTCCCCGCCGGTCCAC 6492 Query 146968 ACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAG 147027 || || || || || ||||||| | ||||| ||||| ||||||||| | ||| Sbjct 6491 ACGAACTCACCGACCTCGAGGCCGGCCTGCGCGGCCATCATGTGGGTGAGCAGGGCATAG 6432 Query 147028 CTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCAC 147087 || |||||||| || || || ||| || ||| | | ||| || |||||||| Sbjct 6431 GACGCGATGTTGAACGGCACACCGAGGAACAGGTCGGCACTGCGCTGATAGAGCTGGCAG 6372 Query 147088 GAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT- 147146 ||||| | |||||||| ||||| |||||| | | | |||||||||||||| |||||| Sbjct 6371 GAGAGTTTTCCGTCGGCGACGTAGAACTGGAAGAAGGCGTGGCACGGCGGCAACGCCATC 6312 Query 147147 GGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGAC 147179 ||||| | ||| | ||||||||| ||||| Sbjct 6311 TGCGGG-ATCTCCCCCACGTTCCAGGCGGAGAC 6280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581467067431200