Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_026584.1
Length=109871
Score E
Sequences producing significant alignments: (Bits) Value
seq68307 212 4e-50
seq24208 185 6e-42
seq101977 152 4e-32
seq216206 105 5e-18
seq50100 82.4 5e-11
>seq68307
Length=2902
Score = 212 bits (234), Expect = 4e-50
Identities = 262/358 (73%), Gaps = 3/358 (1%)
Strand=Plus/Plus
Query 97484 GACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCG 97543
|||| | ||| ||||| |||||| | ||| |||||||| |||||||||| |
Sbjct 1678 GACCACGGCCGAGATCTCCTCGTCGGTGATGAACGCGCCCTGCATCCGGATGGGGCGGTT 1737
Query 97544 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97603
||| |||| || | ||| | ||||| ||||| || ||||||| ||| || || ||
Sbjct 1738 CGCGCCCATCGGGATGAAGAGTCCGTCGCCCATGCCGATGAGCTTCTCCGCGCCCGGCTG 1797
Query 97604 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97663
|| ||||| || || ||||| || || | || ||||||| ||||| ||||| ||
Sbjct 1798 ATCGAGGATGACGCGCGAGTCGGTCAGCGACGACGTCGCGAACGCGAGCCGCGACGGGAC 1857
Query 97664 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97723
||||| ||||| ||||| ||||| || || || || || ||||| ||||| || || ||
Sbjct 1858 GTTGGTCTTGATCAGGCCGGTGACGACGTCGACCGACGGTCGCTGGGTCGCGAGCACCAG 1917
Query 97724 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97783
|| ||||| || ||||| |||||||||| ||||||||| || | ||||||| ||
Sbjct 1918 GTGGATACCCGCCGCGCGGGCCTTCTGGGTGATGCGGACGATCGCGTCCTCGACGTC--- 1974
Query 97784 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97841
|||| || |||||||||||| ||||| |||||||| | ||| ||||||||||
Sbjct 1975 CTTGGGCGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGATGGCCAGGATGTAGGGG 2032
Score = 138 bits (152), Expect = 8e-28
Identities = 136/176 (77%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 97968 AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGC 98027
|| || ||||| || | ||| || || ||||| ||||||||||||||||| | ||| | |
Sbjct 2219 AGATGCGGGATGCCCTCGTACGGCGTCAGTTCGACCATCTTCGGGTCGATGAGGATCATC 2278
Query 98028 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 98087
||| || || | || ||| |||| || |||| ||||||||| | |||||||
Sbjct 2279 CGGACGTCGTCCGGGGTCGCCCGGGTCAGCAGTGACACCAACATCGAGTTCACGAAGCTG 2338
Query 98088 GACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAGGTT 98143
||||||||||| ||||||| ||| || || |||||||||||||| ||||| |||||
Sbjct 2339 GACTTGCCCGAACCGGTGGAGCCGGCGACGAGCAGGTGGGGCATCTTGGCGAGGTT 2394
>seq24208
Length=1566
Score = 185 bits (204), Expect = 6e-42
Identities = 221/298 (74%), Gaps = 3/298 (1%)
Strand=Plus/Plus
Query 97544 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97603
|||||||| || ||||| | |||||| ||| || | |||| |||||| || ||
Sbjct 431 CGCCCCCATCGGGAGGAACAGCCCGTCGCCCTGGCCGACCAGCTTCTCGGCGCCCGGCTG 490
Query 97604 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97663
||| ||||| |||||||| ||| ||| | |||||||| | ||| | ||||||||
Sbjct 491 GTCGAGGATGACCCGGCTGTCGCCGAGGCTCGACGTGGCGAAGGCGAGTCGCGACGGCAC 550
Query 97664 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97723
||||| ||||| || || || || |||||||| || |||||||||||||| || |||||
Sbjct 551 GTTGGCCTTGATCAGACCCGTCACCACATCCACCGACGGCCGCTGCGTCGCGAGCACGAG 610
Query 97724 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97783
|| || ||||| |||||||| ||||| |||||| || || ||||||| ||
Sbjct 611 GTGGATGCCGGCGGCGCGCGCGAGCTGGGTGATGCGCACGATCGACTCCTCGACGTC--G 668
Query 97784 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97841
| | | || ||||||| ||||| || || ||||||||||| |||| || |||||||
Sbjct 669 CGCGGCG-CGACCATCATCAGGTCGGCCAGCTCGTCGACCACGACCAGGAGGTAGGGG 725
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 98069 CATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGG 98128
|||||||||||||||||| |||||||| |||||||||| ||| || || |||||||| ||
Sbjct 1013 CATCGAGTTGATGAAGCTCGACTTGCCGGATCCGGTGGAGCCGGCGACGAGCAGGTGCGG 1072
Query 98129 CATTTTGGCCAGGTTC 98144
||| || || ||||||
Sbjct 1073 CATCTTCGCGAGGTTC 1088
>seq101977
Length=1174
Score = 152 bits (168), Expect = 4e-32
Identities = 189/254 (74%), Gaps = 5/254 (2%)
Strand=Plus/Plus
Query 97589 CTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCTG-TGGCGAACG 97647
|||||| || || ||| ||||| || || || ||||| || || |||| ||||||| |
Sbjct 3 CTCGGCGCCCGGCTGGTCGAGGATGACGCGACTGTCGGTCAGCGA-GCTGGTGGCGAAGG 61
Query 97648 AGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCT 97707
| || | || |||||||||| ||||| || || ||||| || || ||||||||||| |
Sbjct 62 ACAGTCGGGAGGGCACGTTGGTCTTGATCAGACCGGTGACGACGTCGACGGAGGGCCGTT 121
Query 97708 GCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGT 97767
| || || ||||| || || || ||||| || || |||||||||| ||| ||||| ||
Sbjct 122 GGGTGGCGAGGACCAGGTGGATCCCGGCGGCCCGGGCCTTCTGGGTGATCCGGACGATCG 181
Query 97768 TGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTA 97827
| ||||||| || | | ||||| |||||| ||||| ||||| ||||||| |
Sbjct 182 CGTCCTCGACGTC--CCGCGGAGCCG-TCATCATCAGGTCGGCGAGCTCGTCGATGATCC 238
Query 97828 CCACGATGTAGGGG 97841
||| |||||| |||
Sbjct 239 CCAGGATGTACGGG 252
Score = 143 bits (158), Expect = 2e-29
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 97944 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACC 98003
|||| ||||| | ||| || ||||| ||||| || | ||| || ||||| || |||
Sbjct 415 GGCTGGGTGATGATCGGGGTCAGCAGGTGCGGGATGCCCTCGTACGGCGTGAGCTCGACC 474
Query 98004 ATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 98063
||||| |||||||||| | | | |||| | || ||| || | |||| ||
Sbjct 475 ATCTTGGGGTCGATCAGCACCATCCGGACCTCGGCCGGCGAGGCCCGCTGCAGCAGCGAG 534
Query 98064 ACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGG 98123
|||||||||||||| | ||||||||||||||| || ||||||||||| ||||||||||||
Sbjct 535 ACCAGCATCGAGTTCACGAAGCTGGACTTGCCGGAACCGGTGGCGCCGGCCACCAGCAGG 594
Query 98124 TGGGGCATTTTGGCCAGGTTCA 98145
|| || | |||||||||||||
Sbjct 595 TGCGGGGTCTTGGCCAGGTTCA 616
>seq216206
Length=797
Score = 105 bits (116), Expect = 5e-18
Identities = 363/552 (66%), Gaps = 27/552 (5%)
Strand=Plus/Plus
Query 99705 GTCGAGCTTGGGGAAATCCGGCTCGCGGATCTCGTCAGGCCACCGCAGCGTCTGCAACGT 99764
||||||| ||||| || | |||||| | |||||| ||| |||||||||||| |
Sbjct 4 GTCGAGCCCCGGGAACTCGGCCTCGCGCACCTCGTCGTCCCAGAGCAGCGTCTGCAGCAG 63
Query 99765 CAGAACCTCATTCTTGCCCGTCACA-CGCAACACTGCCAGGTGCTCCTTGCTCCGCAGGG 99823
||| ||||| | | ||| | || || ||| | | ||| ||||| |||| ||||| |
Sbjct 64 CAGCACCTCGT-CGTGCAC-TCGCAGCGCCGC-CAGCCGGGTGCG--TTGC--CGCAGCG 116
Query 99824 TCACCCGTACGATGGCGACCTTG---TCGGCGTCAGAGAGCGTCCTAGCTAGCAGAGCGT 99880
| || ||||| || | || |||| || ||||| | ||||| ||||
Sbjct 117 AGATGCGCACGATCGC---CGTGCGCTCGGTCTCCTCCAGCGTGCGGCGCAGCAGCGCGT 173
Query 99881 ACGGCCGCACCGATCCC---TCTGCGTTCAGGTAGTAGGGTTTGTCGAGCAGGATCGGGT 99937
||| | || ||| | || | ||||||||| |||||| |||||| |
Sbjct 174 ACGCCTTCATCGAGCTGGAATCCGGCGCCAGGTAGTAACTGCGGTCGAGGCGGATCGCAT 233
Query 99938 CGACCTCCCCGGCCGGCACGAACTCCACGACGTCAATCACCTTGTTGGTTTCGCTGGGCA 99997
| |||| | | | ||||||||||| |||||||| || | | || ||| ||||
Sbjct 234 CCACCTGCTCCGAGGGCACGAACTCGACGACGTCGATGTCGCGGCTGCGCTCGGCCGGCA 293
Query 99998 GTTCTGCCAAGTCCTCATTGGTCAGTAGGGCGGTTTGCCCGTCGACCTCGAACACCTTGC 100057
| |||| || || ||| | || | | | || | || || | ||| | |||||
Sbjct 294 GCGACGCCAGATCGTCCTTGCTGAGCACGACCGTGCGGTCGCCGTCGTCGTAGGCCTTGT 353
Query 100058 CCAGATCGGC-CGTGTGG-ACCTGCTCCCCACACGTCTCACAGACCTTG---TGGTAGCG 100112
| ||| || || || || ||| || || |||| || |||| ||||||||
Sbjct 354 C--GATGTGCTCGAAGGGCACGACCTCGCCGCAGATCTCGCA---CTTGCGCTGGTAGCG 408
Query 100113 AATCCGCCCGCCGTCCTGGACGTGCGCCAGATGGCCCTTCAGGTCGTGTTCCTCGGTGGC 100172
|| ||||||| ||| | | ||||| || |||| | || |||||| || || |||||
Sbjct 409 GATGCGCCCGCTGTCGTCGTCGTGCACCTGATGCAGCGGCACGTCGTGGTCTTCCGTGGC 468
Query 100173 CGCGTACATCTTCACCGGCACGTTGACCAACCCGAAGTTGACCGCGCCTGTCCAAACTGC 100232
|| | | | ||| || ||||||||||||| ||||||| | | || ||| |||| | ||
Sbjct 469 CGAGAAGAGCTTGACGGGCACGTTGACCAGCCCGAAGCTCAGCGAGCCCTTCCAGATCGC 528
Query 100233 TCTCATGCCTGC 100244
||||| |||||
Sbjct 529 CCTCATTCCTGC 540
>seq50100
Length=1361
Score = 82.4 bits (90), Expect = 5e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 54227 GTTCCCCACCATCACGCCTCACGACCTCCGGCACACCTGCGCATCGCTGGCCATCTCCTC 54286
||| || | | |||| || |||||||| ||||||||| || ||||| || ||||| |
Sbjct 277 GTTTCCGATCGTCACTCCGCACGACCTGCGGCACACCGCTGCCTCGCTCGCTATCTCGGC 218
Query 54287 GGGGGCCAACGTCAAGGCCGTCCAGAACCTCCTGGGGCAC 54326
||| || ||||||||||||||||||| | | || || |||
Sbjct 217 GGGCGCGAACGTCAAGGCCGTCCAGACCATGCTCGGACAC 178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 350275529377816
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