Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_026589.1 Length=55832 Score E Sequences producing significant alignments: (Bits) Value seq157980 111 6e-20 seq125305 87.8 6e-13 >seq157980 Length=2738 Score = 111 bits (122), Expect = 6e-20 Identities = 81/94 (86%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 43211 CTACGACACCGAGTTTCTCGAAGACGGCCACACTATCGAGCTGATCTCGATTGGCATCGT 43270 ||||||||||||||| |||||||||||| | || |||| ||||||||||| |||||||| Sbjct 694 CTACGACACCGAGTTCCTCGAAGACGGCAAGACCGTCGACCTGATCTCGATCGGCATCGT 635 Query 43271 CTGCGAGGACGGCCGCGACTACTACGCCGTCAAC 43304 | ||| || |||||||| ||||||||| ||||| Sbjct 634 CGCCGAAGATGGCCGCGAGTACTACGCCATCAAC 601 Score = 87.8 bits (96), Expect = 6e-13 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 43542 CCGGAGCTGTGGGCCAACTATGCGGCGTACGACCACGTGGTCCTGGCGCAGCTGTGGGGC 43601 || || ||||||||| |||| || |||||||||||||| | ||| || ||||||| ||| Sbjct 400 CCCGAACTGTGGGCCGACTACGCCGCGTACGACCACGTCGCCCTCGCCCAGCTGTTCGGC 341 Query 43602 CGCATGATCTCGCTGCCCAAGGGGCTCCCGATGTTCACCCATGACCTGCAGCAGCTGCTG 43661 |||||| ||||||| || |||| |||| |||| | || | | || || | Sbjct 340 AAGATGATCAAACTGCCCACCGGCATCCCCATGTACACCAACGAGATCCGCCAACTCGTC 281 Query 43662 GAAACCATGCCCGAATTCGAGAAGCCCTCCCAGGTCGGCACCGAGCACAACGCGCTCGAG 43721 | | |||| |||||| ||||| |||| || || |||||||||||||| Sbjct 280 GCCCTCCACCCCGGATTCGACGAGCCCGAACAGGCCGAGGGCGTTCACAACGCGCTCGAC 221 Query 43722 GATGCCCG 43729 || ||||| Sbjct 220 GACGCCCG 213 >seq125305 Length=4407 Score = 87.8 bits (96), Expect = 6e-13 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 43211 CTACGACACCGAGTTTCTCGAAGACGGCCACACTATCGAGCTGATCTCGATTGGCATCGT 43270 ||||||||||||||| |||| ||||| | || ||||| ||| ||||||| ||| |||| Sbjct 2005 CTACGACACCGAGTTCATCGAGGACGGGCGGACCATCGATCTGGTCTCGATCGGCGTCGT 2064 Query 43271 CTGCGAGGACGGCCGCGACTACTACGCCGTC 43301 | ||||||||| || || | |||||||||| Sbjct 2065 CGCCGAGGACGGTCGGGAGTTCTACGCCGTC 2095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177953336381724