Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq173999 138 4e-28 seq2386 109 2e-19 seq224441 84.2 8e-12 >seq173999 Length=379 Score = 138 bits (152), Expect = 4e-28 Identities = 230/328 (70%), Gaps = 16/328 (5%) Strand=Plus/Minus Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCACCACGGAC-TGCGCCTGCTG 36771 |||| || || |||||||| ||||||| |||||| || | | || | ||| |||| Sbjct 325 TCGGTCCGGCCGGCACCGGCAAGACCTACCTGGCGATGG-CGAAGGCCGTGCAGGCGCTG 267 Query 36772 GAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAAG 36831 || |||||| || | || || || | || || ||||| |||||||| | |||| | Sbjct 266 CAGCACAAGGACGTCAACCGGATCATCCTGACCCGACCCGCGGTCGAGGCGGGGGAGCGG 207 Query 36832 CTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCTG 36891 || ||||||||||| ||| || |||||||| | || |||||| |||| || Sbjct 206 CTGGGCTACCTGCCGGGCACGCTCAGCGAGAAGATCGACCCCTACCTGCGCCCGCTGTAC 147 Query 36892 GACGCGGTGATCGACCTGGTTGGCCC---GACGATGGCCAAGCGCCTGCAGGAGACCCGC 36948 |||||| || |||| || | | ||| ||| || | ||| |||| || |||| Sbjct 146 GACGCGCTGCACGACATGCTCGACCCCGAGACCGTGCCGAAG---CTGCTGG----CCGC 94 Query 36949 CAGC----TCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTT 37004 | || ||||| | || |||||||| |||||||| || || || |||||||| |||| Sbjct 93 CGGCACCATCGAGGTGGCGCCGCTGGCGTACATGCGCGGGCGCACGCTCAACGACGCGTT 34 Query 37005 CCTCATCGCCGACGAGATGCAGAACGCC 37032 | ||||| ||||||| ||||||| || Sbjct 33 CATCATCCTCGACGAGGCGCAGAACACC 6 >seq2386 Length=6545 Score = 109 bits (120), Expect = 2e-19 Identities = 132/176 (75%), Gaps = 3/176 (2%) Strand=Plus/Minus Query 36953 TCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTTCCTCATCG 37012 ||||| |||| ||||||||||||||||| ||||| ||| |||||||| ||||| ||||| Sbjct 5347 TCGAGGTCGCGCCGCTGGCCTACATGCGTGGCCGGACCCTCAACGACGCGTTCATCATCC 5288 Query 37013 CCGACGAGATGCAGAACGCCAC-CCCGCGACAGGCCGCGCTGCTGGTGACCCGCCTGGGC 37071 ||||||| ||||||| |||| |||| | ||| | || | ||||||| || ||| Sbjct 5287 TCGACGAGGCGCAGAACACCACGCCCGAG-CAGATGAAGATGTTCCTGACCCGGCTCGGC 5229 Query 37072 TTCGGAACGCGGGCCGTCTTGAACGGTGACCCGGCCCAGTGCGACCT-CCCGGCGG 37126 ||||| | || |||| | | ||| ||| ||||| ||||| |||||||| Sbjct 5228 TTCGGTTCCAAGGTCGTCGTCACCGGCGACGTCACCCAGGTGGACCTGCCCGGCGG 5173 >seq224441 Length=752 Score = 84.2 bits (92), Expect = 8e-12 Identities = 152/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 36815 TCGAGGCCGAGGAGAAGCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGT 36874 ||||||| | |||| |||||||| |||||||||| | || ||||| | |||| Sbjct 239 TCGAGGCGGGGGAGCGGCTCGGCTTCCTGCCCGGCACGCTGACCGACAAGATCGACCCGT 298 Query 36875 ACCTGATCCCGATGCTGGACGCGGTGATCGACCTGGTTGGCCCGACGATGG---CCAAGC 36931 | ||| |||| | |||||| | | ||| || | | ||| | | | | |||| Sbjct 299 ATCTGCGCCCGCTCTACGACGCGCTCAACGAGATGATGGATCCGGAGCTCGTGCCGAAGC 358 Query 36932 GCCTGCAGGAGACCCGCCAGCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCT 36991 ||| | |||| || ||||| |||| ||||| ||||||||||| ||||| ||| Sbjct 359 ---TGCTCGCGACCGGCACCGTCGAGGTCGCGCCGCTCGCCTACATGCGCGGCCGCACCC 415 Query 36992 TCAACGACACGTTCCTCATCGCCGACGAGATGCAGAACGCC 37032 ||||| || | ||| || || ||||||| ||||||| || Sbjct 416 TCAACAACGCCTTCGTCGTCCTCGACGAGGCGCAGAACACC 456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180201913328154