Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_026594.1
Length=56537
Score E
Sequences producing significant alignments: (Bits) Value
seq173999 138 4e-28
seq2386 109 2e-19
seq224441 84.2 8e-12
>seq173999
Length=379
Score = 138 bits (152), Expect = 4e-28
Identities = 230/328 (70%), Gaps = 16/328 (5%)
Strand=Plus/Minus
Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCACCACGGAC-TGCGCCTGCTG 36771
|||| || || |||||||| ||||||| |||||| || | | || | ||| ||||
Sbjct 325 TCGGTCCGGCCGGCACCGGCAAGACCTACCTGGCGATGG-CGAAGGCCGTGCAGGCGCTG 267
Query 36772 GAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAAG 36831
|| |||||| || | || || || | || || ||||| |||||||| | |||| |
Sbjct 266 CAGCACAAGGACGTCAACCGGATCATCCTGACCCGACCCGCGGTCGAGGCGGGGGAGCGG 207
Query 36832 CTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCTG 36891
|| ||||||||||| ||| || |||||||| | || |||||| |||| ||
Sbjct 206 CTGGGCTACCTGCCGGGCACGCTCAGCGAGAAGATCGACCCCTACCTGCGCCCGCTGTAC 147
Query 36892 GACGCGGTGATCGACCTGGTTGGCCC---GACGATGGCCAAGCGCCTGCAGGAGACCCGC 36948
|||||| || |||| || | | ||| ||| || | ||| |||| || ||||
Sbjct 146 GACGCGCTGCACGACATGCTCGACCCCGAGACCGTGCCGAAG---CTGCTGG----CCGC 94
Query 36949 CAGC----TCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTT 37004
| || ||||| | || |||||||| |||||||| || || || |||||||| ||||
Sbjct 93 CGGCACCATCGAGGTGGCGCCGCTGGCGTACATGCGCGGGCGCACGCTCAACGACGCGTT 34
Query 37005 CCTCATCGCCGACGAGATGCAGAACGCC 37032
| ||||| ||||||| ||||||| ||
Sbjct 33 CATCATCCTCGACGAGGCGCAGAACACC 6
>seq2386
Length=6545
Score = 109 bits (120), Expect = 2e-19
Identities = 132/176 (75%), Gaps = 3/176 (2%)
Strand=Plus/Minus
Query 36953 TCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTTCCTCATCG 37012
||||| |||| ||||||||||||||||| ||||| ||| |||||||| ||||| |||||
Sbjct 5347 TCGAGGTCGCGCCGCTGGCCTACATGCGTGGCCGGACCCTCAACGACGCGTTCATCATCC 5288
Query 37013 CCGACGAGATGCAGAACGCCAC-CCCGCGACAGGCCGCGCTGCTGGTGACCCGCCTGGGC 37071
||||||| ||||||| |||| |||| | ||| | || | ||||||| || |||
Sbjct 5287 TCGACGAGGCGCAGAACACCACGCCCGAG-CAGATGAAGATGTTCCTGACCCGGCTCGGC 5229
Query 37072 TTCGGAACGCGGGCCGTCTTGAACGGTGACCCGGCCCAGTGCGACCT-CCCGGCGG 37126
||||| | || |||| | | ||| ||| ||||| ||||| ||||||||
Sbjct 5228 TTCGGTTCCAAGGTCGTCGTCACCGGCGACGTCACCCAGGTGGACCTGCCCGGCGG 5173
>seq224441
Length=752
Score = 84.2 bits (92), Expect = 8e-12
Identities = 152/221 (69%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 36815 TCGAGGCCGAGGAGAAGCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGT 36874
||||||| | |||| |||||||| |||||||||| | || ||||| | ||||
Sbjct 239 TCGAGGCGGGGGAGCGGCTCGGCTTCCTGCCCGGCACGCTGACCGACAAGATCGACCCGT 298
Query 36875 ACCTGATCCCGATGCTGGACGCGGTGATCGACCTGGTTGGCCCGACGATGG---CCAAGC 36931
| ||| |||| | |||||| | | ||| || | | ||| | | | | ||||
Sbjct 299 ATCTGCGCCCGCTCTACGACGCGCTCAACGAGATGATGGATCCGGAGCTCGTGCCGAAGC 358
Query 36932 GCCTGCAGGAGACCCGCCAGCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCT 36991
||| | |||| || ||||| |||| ||||| ||||||||||| ||||| |||
Sbjct 359 ---TGCTCGCGACCGGCACCGTCGAGGTCGCGCCGCTCGCCTACATGCGCGGCCGCACCC 415
Query 36992 TCAACGACACGTTCCTCATCGCCGACGAGATGCAGAACGCC 37032
||||| || | ||| || || ||||||| ||||||| ||
Sbjct 416 TCAACAACGCCTTCGTCGTCCTCGACGAGGCGCAGAACACC 456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180201913328154
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |