Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_026596.1 Length=57052 Score E Sequences producing significant alignments: (Bits) Value seq232712 178 5e-40 seq157980 105 2e-18 >seq232712 Length=770 Score = 178 bits (196), Expect = 5e-40 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44765 CATTAACCAGCTGCGGCCGGGTGTCGTGGTGATCGAGAACGTAAGGGGGTTGCTCAGTGC 44824 ||| | ||| || || ||| | |||||| ||||| || || |||||| |||||||||| Sbjct 215 CATCACCCACCTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGC 156 Query 44825 AAGGGCCTATCGCGCAATGGAATCCGAAGAGGCAGCTGTGGGAGACGGGGCAGATGGACC 44884 | ||| ||||| || |||||||||| | | | |||||||| | | |||| Sbjct 155 CCGAGCCCATCGCCCAGTGGAATCCGAGTCGAATGGTCTGGGAGACCACGACTCTCGACC 96 Query 44885 TGTTCTCCGGGCACTCGGTGCCGTACTCGGAGACCTTGCCGACCTCGGGTATGACGCGCA 44944 ||||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||| Sbjct 95 TGTTCTCCGAGCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCA 36 Query 44945 GTGGATCACTCTTGCCGCTTCCGACGTCGGCGC 44977 |||| ||||| || |||| |||| ||||| ||| Sbjct 35 GTGGGTCACTGTTCCCGCCTCCGCCGTCGACGC 3 Score = 87.8 bits (96), Expect = 7e-13 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 44476 TCGGTTCGCTGTTCTCCGGCGCTGGCGGCCTCGACATCGCCGTCGAGCAGTTCTTCGGCG 44535 |||| || || ||||| || |||||||||||| |||| ||| ||||||||| | Sbjct 448 TCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGCGTGTGAGGCGTTCTTCGGTG 389 Query 44536 CCCGCACGGTGTGGCATTGCGAGCTGAACCCGGCCGCGTCCAAGGTGCTCGCGCACCGCT 44595 | || | ||||| ||| | |||| || ||||| | | ||||| |||| || Sbjct 388 CGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGCCCACCACT 329 Query 44596 GGCCCGGTGTGCCGAACCTCGGCGATATCACCGCGGTCGACTGGTCAGAAGTCGAGCCGG 44655 |||| |||||||||| |||||| |||||||| |||||||| | | ||||| || | Sbjct 328 GGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGTCGAACCAG 269 Query 44656 T 44656 | Sbjct 268 T 268 >seq157980 Length=2738 Score = 105 bits (116), Expect = 2e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 43534 CTATGACACTGAGTTTCTCGAAGACGGCCGCACGATCGAGCTGATCTCGATTGGCATCGT 43593 ||| ||||| ||||| |||||||||||| || |||| ||||||||||| |||||||| Sbjct 694 CTACGACACCGAGTTCCTCGAAGACGGCAAGACCGTCGACCTGATCTCGATCGGCATCGT 635 Query 43594 CTGTGAGGACGGCCGCGAGTACTACGCCGTCAACAGCGACATGGACCACAAGCGAATCGC 43653 | || || |||||||||||||||||| ||||| |||| ||| | || ||| Sbjct 634 CGCCGAAGATGGCCGCGAGTACTACGCCATCAACTCCGACGCTGACTGGGACCGCATCCG 575 Query 43654 CAAGGACGACTGGCTC 43669 || |||||||||||| Sbjct 574 GAAAGACGACTGGCTC 559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181844490813844