Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq10526 206 3e-48 seq41046 140 3e-28 seq28654 132 5e-26 seq76306 114 1e-20 seq27511 113 5e-20 seq170880 93.3 4e-14 seq133356 89.7 5e-13 >seq10526 Length=5062 Score = 206 bits (228), Expect = 3e-48 Identities = 490/732 (67%), Gaps = 29/732 (4%) Strand=Plus/Minus Query 104632 CCCAATCTGTCGCACATGCTTTACGGATTTATACCGATTTGCGGTGGCGACGGCATCAAC 104691 || ||||| | || |||| ||||| ||||| || |||||||| || |||||||| || Sbjct 4060 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATTAAT 4001 Query 104692 GACGCTCTAAAGACCGTTCCG-GGTAGTTTTGAAGCGTTGCAAAAATCGTGCGCTGGACG 104750 || | |||| | | || || ||||| |||| | || ||| || || || Sbjct 4000 GATAGTTTAAA-AGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCG 3942 Query 104751 GGAAAACTTCAAAGTGGCCATTCACGATCCGTGGGCGGCGGTGCAAAAACCGCAAAAAGG 104810 || |||||||||| | || |||||||| ||||| || | |||||||| |||||||| Sbjct 3941 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 3882 Query 104811 TGCCTCCGCTTGGAACGAACCGTACAAAGGCAATTTTGGTCAGATAATGGCCATCAAAAA 104870 || | |||||||| || ||||||||||| ||||| || ||||| | | ||| | Sbjct 3881 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACA 3822 Query 104871 AGCCAATCCTCAATTGCGCGTATTGCCCTCGGTGGGCGGGTGGACGCTGTCCGATCCTTT 104930 |||| ||| ||||| | | ||||| | || ||||||||||| |||||||||| Sbjct 3821 AGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCTTT 3762 Query 104931 ----TTATCACATGCACGACGCTGAAAAACGTGCCACG-TTTGTGGAGTCGGTGCGCGAA 104985 || | | || || | || | | | |||| |||||| |||| || || Sbjct 3761 CTTCTTTTTAGTTG-ACAAATCTAAGAGA----ACACGATTTGTGCAGTCAGTAAAGGAG 3707 Query 104986 TTTTTGTTGACTTGGAAATTCTTCGATGGCGTCGACATCGATTGGGAGTTTCCGGGCGGC 105045 ||| | | || ||||||||||||||||| || || |||||||||||||| || || ||| Sbjct 3706 TTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGC 3647 Query 105046 AAAGGCGCCAACCCCAATCAAGGCGACGCGAAACGCGATGCTCTCACGTACGTGTCTCTT 105105 ||||| || ||||| | | || | | || |||| | || || | | Sbjct 3646 AAAGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTGTTATGTAAGTTTG 3590 Query 105106 TTGAAAGAGTTGCGTTCGATGCTCGACGA----TTTGCAAAAACAAACCAATCGCTCCGA 105161 ||||||| || ||| ||||||||| || | ||| || | | || | ||| Sbjct 3589 ATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCTGCTAAGA-ATGGTAAGAAATACGA 3531 Query 105162 GCGTTTGTTGCTCACCAGCGCCATCAGCGCGGGCGACGACAAGATCGCCGTGGTGGATTA 105221 || | || || || ||||| || || || ||| || || || || Sbjct 3530 --ATTAACTTCT-------GCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTGACTA 3480 Query 105222 CGGTCACGCTCAAACCTACTTGGATTTGATATTTTTGATGAGTTACGATTTTAAAGGCGC 105281 ||| | ||||||| || ||||| || || |||||||||||||| || || || || Sbjct 3479 TGGTAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGC 3420 Query 105282 CTGGTCCAACACAAATCTCGGTCATCAGACGGCGTTGTACGCACCCGCGTGGAAACCCAA 105341 |||||| || | ||| || ||||| ||| | |||||||| || |||||||| ||||| Sbjct 3419 CTGGTCAAATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAA 3360 Query 105342 CGAACGCTACAC 105353 ||| ||||| Sbjct 3359 GGAAACTTACAC 3348 >seq41046 Length=7774 Score = 140 bits (154), Expect = 3e-28 Identities = 175/236 (74%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542 || ||||| | ||||| | ||| || || | |||||||||||||||||||||||||| Sbjct 7152 TTACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCA 7211 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | ||| | | | || || || ||||| || ||||| |||||||| ||||| || || Sbjct 7212 GACAATG-TACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGG 7270 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATT 134661 || || ||||| || ||||| ||||| ||| | | | | || || || || | | Sbjct 7271 TGGAATACCTTCCTTATCTTGGATTTTAGCTTTTAACATTTTCTATAGTATCAGAGGCCT 7330 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||| ||||| |||||||||||||| || | || || ||||||||||||||| || Sbjct 7331 CCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 7386 >seq28654 Length=3315 Score = 132 bits (146), Expect = 5e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || ||||| || | ||| || || ||||| |||||||| || ||||| Sbjct 2386 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAG 2445 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| | ||| || | || || || || ||||||||||| || ||||| || | Sbjct 2446 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 2505 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || ||||||||||| ||| || || | || ||||| | ||| | Sbjct 2506 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 2565 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 | || | ||||||||||||||| || | ||||| || || || ||||||||| Sbjct 2566 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTG 2618 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || |||| || || || || || || |||||||| ||||||||||| Sbjct 1704 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 1763 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || | || || || ||||| || | |||||||||||| || || Sbjct 1764 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1823 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| ||||| ||||| ||||| ||| || || | || || || | |||||| Sbjct 1824 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 1883 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || |||||||| || || |||| |||||||| ||||| ||||| Sbjct 1884 TCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGTCGAGCTGTTTGC 134574 || ||||| ||||| ||||||||||| || |||| || || || | || |||| Sbjct 1962 GTAGATTCTTTTTGGATGTTGTAGTCAG--ACAGTGTACGACCATCTTCTAATTGCTTGC 2019 Query 134575 CTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTT 134634 | |||||||| | ||| || ||||| || || ||||||||||| ||||| ||||| || Sbjct 2020 CCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCTT 2079 Query 134635 TGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAG 134694 | || || | |||||| || | ||| || || | |||||| ||||| || || | | Sbjct 2080 TCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTTTTCCAGTGAGTG 2139 Query 134695 TTTTAACGAAAATTTGCAT 134713 ||||||| || |||||||| Sbjct 2140 TTTTAACAAAGATTTGCAT 2158 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || |||| || | || || || || || ||||| ||||||||||| Sbjct 1476 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 1535 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || ||||| ||||| ||||| || | ||| || ||||| || || Sbjct 1536 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 1595 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| |||||||| || || || || | ||||| || | ||||| Sbjct 1596 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACC 1655 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || |||| || || || || |||||||| Sbjct 1656 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 1702 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || | ||||| || |||||||||||||| || || || | || | Sbjct 2169 AGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGG 2228 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || || ||||| || |||||||| | | ||| ||||| || || || || ||| Sbjct 2229 CCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCT 2288 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || ||| || || || | |||||||||| || || || | ||| Sbjct 2289 TTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTG 2348 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 |||||||| || || | ||| ||||| || || |||||| Sbjct 2349 ATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 2387 >seq76306 Length=316 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 |||| || || || ||||| || | ||| | || |||||||| || || || ||||| | Sbjct 285 TTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTG 226 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||| | || | || || || || || || || ||||||| | || ||||| || Sbjct 225 ACAATG-TGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGA 167 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || |||||||| || |||||||| ||| || || || | ||| || || | |||| Sbjct 166 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCC 107 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || |||||||| || ||||||||||| ||||| |||||||| Sbjct 106 ACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 57 >seq27511 Length=800 Score = 113 bits (124), Expect = 5e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 |||| || || || |||| ||| | ||| | || |||||||| ||||| || || || | Sbjct 445 TTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATCTG 386 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||| | | | || || |||||||| ||||||||||| | | ||| || || || Sbjct 385 ACAATG-TACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGA 327 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||||||||| |||||||| ||| || || || | ||| || || | |||| Sbjct 326 GGAATGCCTTCTTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 267 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | ||| || ||||| || || | || || || |||||||||||| Sbjct 266 ACTTCCAAAGTGATAGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 216 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| ||||| || |||| || ||||| | || |||||||| ||||| |||||||| Sbjct 673 TTCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAG 614 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || || ||||| || || |||||||| | | |||||||| || | Sbjct 613 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 554 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| || |||||||| || || || | ||| || || | ||||| Sbjct 553 GAATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 494 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | ||| || || || || || | || || || |||||||||||| Sbjct 493 CTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 444 >seq170880 Length=1133 Score = 93.3 bits (102), Expect = 4e-14 Identities = 167/242 (69%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803 ||||| ||||| ||| |||| ||| ||||||| || ||||| || |||||| Sbjct 844 ATCGAGGGCATCTACGACACCCTGAAGACGTGCGCCATGATCTCCAAGACCGCCGGCGGT 903 Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863 || || || || | || || | || ||| ||| ||| ||||| ||| |||||| Sbjct 904 ATCGGCCTCCACATTCACAACATCCGTGCCTCCGGAAGCTACATCGGTGGCACAAACGGA 963 Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923 | | | ||| | | ||||||| | ||||| ||||| ||| | | || |||| ||| Sbjct 964 TACTCGAACGGCATCGTGCCCATGCTCCGCGTCTTCAACAACACTGCCCGCTATGTCGAC 1023 Query 7924 CAGGG-GGGAA--AGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||||| ||||| ||||| || || |||||||| | |||||||||||| | ||| Sbjct 1024 CAGGGTGGGAACAAGCGCCCGGGTGCGTTCGCCATCTACCTTGAGCCGTGGCACCCCGAC 1083 Query 7981 AT 7982 || Sbjct 1084 AT 1085 >seq133356 Length=434 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 52805 CGCAAAAACGGACATTGCGGTGCCCACCGTCGATGATCGATTTCTGGATCGTCGCCATCC 52864 |||| || || || || || ||||| || | || || | | ||||||||||| | Sbjct 91 CGCAGGAAAGGGCACTGAGGCGCCCAGCGCTGGTGGTCCTTGGCGGGATCGTCGCCCGCA 150 Query 52865 ATCCATTTCATTATTTCCACTTTGCAAAAAGCACATCGCACTTCGTCGTTGCGACCCAAA 52924 | ||||||||| ||||| ||||| ||||| || || || ||||| ||| ||| |||| | Sbjct 151 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCGCCGCGGCCCAGA 210 Query 52925 TAATAAAAACCGTTTCGAGCGAGTCGTGCGGGCGACAGAAAACACAACGGCCATCCAACA 52984 ||||| || || || | |||||| | |||| | | ||| | |||||||| | | Sbjct 211 TAATAGAAGCCATTCCTCGCGAGTGATTCGGGTAATAAAAATGTGACGGGCCATCCGATA 270 Query 52985 AAAGTGTTGAGTCG 52998 || || || || || Sbjct 271 AATGTCTTTAGCCG 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503647933689160