Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq61277 107 2e-18 seq76033 95.1 2e-14 >seq61277 Length=456 Score = 107 bits (118), Expect = 2e-18 Identities = 189/273 (69%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 176401 CCTGATCGAAGTGATTGTTATAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGA 176460 |||| |||| ||| ||| || | ||| | ||| || ||| || ||| | || || Sbjct 439 CCTGCTCGAGGTGGTTGGAGTACAGGTGCGCATCGCCCAGGGTGTGGATGAAGTCGCCCG 380 Query 176461 CTTCCAAGCCGCATTCCAGCGCGATCAGATGTGTCAGGAGTGCGTAAGAGGCGATGTTGA 176520 || || ||| || | |||| ||| || ||| || ||||| || |||||||||| Sbjct 379 GTTGCAGACCGACCACCTGGGCGACCAGGTGCACCAGCAGGGCGTAGGACGCGATGTTGA 320 Query 176521 ATGGAAGCCCCAAGAAGACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTTCCCGT 176580 | || | ||| | |||||||||| | || || || | | |||| || || || |||| Sbjct 319 ACGGCACCCCGAGGAAGACGTCCGCCGAGCGTTGGTACAGCTGGCACGAGAGCTTGCCGT 260 Query 176581 TGCGGACATAGAACTGGAA-ACCGTAGTGACACGGCGGCAAAGCCATTAGATCGACCGCC 176639 | ||| ||||||||||| | || |||| |||||||| | ||||| | |||| | Sbjct 259 CGGCGACGTAGAACTGGAACAGCG-AGTGGCACGGCGGTAGCGCCATGTCCTTGACCTCG 201 Query 176640 CCGACATTCCAAGCCGAGACCATATGACGACGG 176672 | ||| ||||| ||||| || || || |||||| Sbjct 200 CTGACGTTCCACGCCGACACGATGTGCCGACGG 168 >seq76033 Length=7108 Score = 95.1 bits (104), Expect = 2e-14 Identities = 185/270 (69%), Gaps = 10/270 (4%) Strand=Plus/Minus Query 176398 TCACCTGATCGAAGTGATTGTTATAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCC 176457 ||||||| |||| ||| |||| ||||||||| || || | | | | | || | Sbjct 6541 TCACCTGGTCGACGTGGTTGTCGTAGATGTGGCAGTCCCCGCCGGTCCACACGAACTCAC 6482 Query 176458 CGACTTCCAAGCCGCATTCCAGCGCG---ATCAGATGTGTCAGGAGTGCGTAAGAGGCGA 176514 |||| || | |||| || ||||| |||| || || || || || || || |||| Sbjct 6481 CGACCTCGAGGCCGG---CCTGCGCGGCCATCATGTGGGTGAGCAGGGCATAGGACGCGA 6425 Query 176515 TGTTGAATGGAAGCCCCAAGAAGACGTC--CACGGACCGCTGATTCCAAAGGCAGGACAG 176572 ||||||| || | || | ||| | ||| ||| | ||||||| ||||||| || Sbjct 6424 TGTTGAACGGCACACCGAGGAACAGGTCGGCACTG--CGCTGATAGAGCTGGCAGGAGAG 6367 Query 176573 TTTCCCGTTGCGGACATAGAACTGGAAACCGTAGTGACACGGCGGCAAAGCCATTAGATC 176632 ||| |||| | ||| ||||||||||| | ||| ||||||||||| ||||| | Sbjct 6366 TTTTCCGTCGGCGACGTAGAACTGGAAGAAGGCGTGGCACGGCGGCAACGCCATCTGCGG 6307 Query 176633 GACCGCCCCGACATTCCAAGCCGAGACCAT 176662 || | |||| || ||||| || ||||| || Sbjct 6306 GATCTCCCCCACGTTCCAGGCGGAGACGAT 6277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620757709845480