Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq263247 131 8e-26 seq76033 116 2e-21 seq61277 87.8 8e-13 >seq263247 Length=570 Score = 131 bits (144), Expect = 8e-26 Identities = 128/163 (79%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 21961 CTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGCTACGCG 22020 ||||| |||||| | ||||| ||||| |||||||| ||||||||||||||||||||| Sbjct 335 CTCTACCAGCGCTCGGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTACGCG 276 Query 22021 CTGCTGACGCACCTCATGGCG--GCCACGGTCGGCATGCAGGCCGAGAAGTTCATCTGGT 22078 ||||| || ||| || | ||| || | | ||| || ||| || ||||||||||| Sbjct 275 CTGCTCACCCACATCCTCGCGCAGCAATG--CGGGCTGGAGGTCGGCGAGTTCATCTGGA 218 Query 22079 CTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGGC 22121 | ||||| ||||||||||| || |||||||| | |||||||| Sbjct 217 CCGGCGGCGACTGCCACCTCTATTCGAACCATCTCGACCAGGC 175 >seq76033 Length=7108 Score = 116 bits (128), Expect = 2e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 21954 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 22013 |||| | |||||||||||||| || ||| ||||||| || ||||| ||||||||||| Sbjct 6372 CTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATCGCGTC 6431 Query 22014 CTACGCGCTGCTGACGCACCTCATGGCGGCCACGGTCGGCATGCAGGCCGAGAAGTTCAT 22073 ||| || ||||| || ||| | ||||| || || |||| | ||| || ||||| | Sbjct 6432 CTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAGTTCGT 6491 Query 22074 CTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGG 22120 ||| | ||||| ||||||||| | ||| |||||| | ||||||| Sbjct 6492 GTGGACCGGCGGGGACTGCCACATCTACGACAACCACGTCGACCAGG 6538 Score = 86.0 bits (94), Expect = 3e-12 Identities = 156/225 (69%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 21589 ATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGGTGCCCAGTGG 21648 ||||||||||||||||| | || | || | || || || |||| || | |||||| Sbjct 6127 ATCTGGGACGAATGGGCGGACCCCGCGGGAGAACTGGGACCCGTCTACGGCGTGCAGTGG 6186 Query 21649 CGCAGCAT-CCAAGGCCCCGAT-GGAAAGAACATCGACCAGCTGGCCAAGGCACAAGAGC 21706 |||||| || | ||||| || || ||||||| ||| | | || || | | || Sbjct 6187 CGCAGCTGGCCCA--CCCCGTCCGGCGAGCACATCGATCAGATCTCGAACGCGCTGGCGC 6244 Query 21707 TGCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCGAGC 21766 ||||| | || ||||| || |||| |||||| ||||||||||||| ||| Sbjct 6245 TGCTGAGGTCGGATCCGGATTCGCGGCGCAACATCGTCTCCGCCTGGAACGTGGGGGAGA 6304 Query 21767 TCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21811 || |||||||| || | |||||||| || | |||||||||| Sbjct 6305 TCCCGCAGATGGCGTTGCCGCCGTGCCACGCCTTCTTCCAGTTCT 6349 >seq61277 Length=456 Score = 87.8 bits (96), Expect = 8e-13 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 21589 ATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGGTGCCCAGTGG 21648 ||||||||||| ||||| | || || | ||||||||| |||| || ||||||| Sbjct 28 ATCTGGGACGAGTGGGCCGACGACGACGGTGAGCTCGGCCCGGTCTACGGCCACCAGTGG 87 Query 21649 CGCAGCATCCAAGGCCCCGATGGAAAGAACATCGACCAGCTGGCCAAGGCACAAGAGCTG 21708 |||||| | ||| || || ||||||||||| | ||| || | || | Sbjct 88 CGCAGCTGGCCCACCCCGGACGGCGGCCACATCGACCAGATCGCCCTGGTGCTCCAGTCG 147 Query 21709 CTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCGAGCTC 21768 |||| | | |||||||| ||| || ||||||| || |||||||| |||| || Sbjct 148 CTGCGGGAGAACCCGGACTCCCGTCGGCACATCGTGTCGGCGTGGAACGTCAGCGAGGTC 207 Query 21769 GACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21811 | | ||||| || | |||||||| || |||||||||||| Sbjct 208 AAGGACATGGCGCTACCGCCGTGCCACTCGCTGTTCCAGTTCT 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235844067967613