Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_027348.2
Length=73882
Score E
Sequences producing significant alignments: (Bits) Value
seq263247 131 8e-26
seq76033 116 2e-21
seq61277 87.8 8e-13
>seq263247
Length=570
Score = 131 bits (144), Expect = 8e-26
Identities = 128/163 (79%), Gaps = 4/163 (2%)
Strand=Plus/Minus
Query 21689 CTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGCTACGCG 21748
||||| |||||| | ||||| ||||| |||||||| |||||||||||||||||||||
Sbjct 335 CTCTACCAGCGCTCGGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTACGCG 276
Query 21749 CTGCTGACGCACCTCATGGCG--GCCACGGTCGGCATGCAGGCCGAGAAGTTCATCTGGT 21806
||||| || ||| || | ||| || | | ||| || ||| || |||||||||||
Sbjct 275 CTGCTCACCCACATCCTCGCGCAGCAATG--CGGGCTGGAGGTCGGCGAGTTCATCTGGA 218
Query 21807 CTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGGC 21849
| ||||| ||||||||||| || |||||||| | ||||||||
Sbjct 217 CCGGCGGCGACTGCCACCTCTATTCGAACCATCTCGACCAGGC 175
>seq76033
Length=7108
Score = 116 bits (128), Expect = 2e-21
Identities = 126/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 21682 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 21741
|||| | |||||||||||||| || ||| ||||||| || ||||| |||||||||||
Sbjct 6372 CTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATCGCGTC 6431
Query 21742 CTACGCGCTGCTGACGCACCTCATGGCGGCCACGGTCGGCATGCAGGCCGAGAAGTTCAT 21801
||| || ||||| || ||| | ||||| || || |||| | ||| || ||||| |
Sbjct 6432 CTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAGTTCGT 6491
Query 21802 CTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGG 21848
||| | ||||| ||||||||| | ||| |||||| | |||||||
Sbjct 6492 GTGGACCGGCGGGGACTGCCACATCTACGACAACCACGTCGACCAGG 6538
Score = 86.0 bits (94), Expect = 3e-12
Identities = 156/225 (69%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 21317 ATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGGTGCCCAGTGG 21376
||||||||||||||||| | || | || | || || || |||| || | ||||||
Sbjct 6127 ATCTGGGACGAATGGGCGGACCCCGCGGGAGAACTGGGACCCGTCTACGGCGTGCAGTGG 6186
Query 21377 CGCAGCAT-CCAAGGCCCCGAT-GGAAAGAACATCGACCAGCTGGCCAAGGCACAAGAGC 21434
|||||| || | ||||| || || ||||||| ||| | | || || | | ||
Sbjct 6187 CGCAGCTGGCCCA--CCCCGTCCGGCGAGCACATCGATCAGATCTCGAACGCGCTGGCGC 6244
Query 21435 TGCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCGAGC 21494
||||| | || ||||| || |||| |||||| ||||||||||||| |||
Sbjct 6245 TGCTGAGGTCGGATCCGGATTCGCGGCGCAACATCGTCTCCGCCTGGAACGTGGGGGAGA 6304
Query 21495 TCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21539
|| |||||||| || | |||||||| || | ||||||||||
Sbjct 6305 TCCCGCAGATGGCGTTGCCGCCGTGCCACGCCTTCTTCCAGTTCT 6349
>seq61277
Length=456
Score = 87.8 bits (96), Expect = 8e-13
Identities = 153/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 21317 ATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGGTGCCCAGTGG 21376
||||||||||| ||||| | || || | ||||||||| |||| || |||||||
Sbjct 28 ATCTGGGACGAGTGGGCCGACGACGACGGTGAGCTCGGCCCGGTCTACGGCCACCAGTGG 87
Query 21377 CGCAGCATCCAAGGCCCCGATGGAAAGAACATCGACCAGCTGGCCAAGGCACAAGAGCTG 21436
|||||| | ||| || || ||||||||||| | ||| || | || |
Sbjct 88 CGCAGCTGGCCCACCCCGGACGGCGGCCACATCGACCAGATCGCCCTGGTGCTCCAGTCG 147
Query 21437 CTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCGAGCTC 21496
|||| | | |||||||| ||| || ||||||| || |||||||| |||| ||
Sbjct 148 CTGCGGGAGAACCCGGACTCCCGTCGGCACATCGTGTCGGCGTGGAACGTCAGCGAGGTC 207
Query 21497 GACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21539
| | ||||| || | |||||||| || ||||||||||||
Sbjct 208 AAGGACATGGCGCTACCGCCGTGCCACTCGCTGTTCCAGTTCT 250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235499635041209
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |