Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_027365.1 Length=58076 Score E Sequences producing significant alignments: (Bits) Value seq74518 206 1e-48 seq156590 80.6 1e-10 >seq74518 Length=2537 Score = 206 bits (228), Expect = 1e-48 Identities = 401/583 (69%), Gaps = 17/583 (3%) Strand=Plus/Minus Query 26520 CGACACCCTGTACGCCGACGTGTCCGAGTGGCAGGTTCCCGTCGACGACAGCTATCCGCA 26579 ||||||||| | ||||||||| ||| | | ||||| ||||||||||||||||| ||| | Sbjct 1372 CGACACCCTCTTCGCCGACGTCTCCTACTTCCAGGTACCCGTCGACGACAGCTACCCGTA 1313 Query 26580 CCGCGTGCTGTGCATCCGGTCGAACGACGGCACCTACCGCGACAAGAAGTG-GCACATCA 26638 || | |||| ||||| |||||||||||||| | ||||||| | | | ||||| | Sbjct 1312 CCCGATCCTGTCGATCCGTTCGAACGACGGCACATTCCGCGACCCGCACTTCGCACAG-A 1254 Query 26639 ACTACCCGTGGTGCAAGCGCGCTGTCGACGACGGCCGCCTGGCATTCTTCATCGTTTACT 26698 ||||| ||||| | ||| ||||| ||| ||||| || ||||| |||| Sbjct 1253 ACTACGCGTGGATCCGCCGCAGCCTCGACCGCGGGCGCCTCCGTGTCGGGATCGTCTACT 1194 Query 26699 TCGTGTGGCGGCCGAATTGGCGCGACGCCGT---CGCCACGCTGAA----ATCGCAAGTG 26751 | ||| ||||| |||| ||| ||| | ||| || | | |||| ||| Sbjct 1193 GCTACCTGCGCCCGAACTGGCTCGAGACCGCGAACACCATGCGGGACATGATCGATCGTG 1134 Query 26752 --GGCGAGCCTCATCCAAAGATGGCCGTGATGATCGACGTTGAGAGCTGGGGCGGCCAGA 26809 |||| | ||||||| | ||| ||||| ||||||| || | ||||| | Sbjct 1133 CGGGCGGACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCC---GGCGGGAACC 1077 Query 26810 TCGGCGGCAACCAGTCGTCGGGGATCAACGCGGCCTACGACGAGATTGCCGCGTG-GCTG 26868 ||||||| | |||| |||||||| ||||| | | | || | || | Sbjct 1076 CCGGCGGCGATGCGTCGGACTGGATCAACCGCACCTACTGGAACCTCGTCGAATACGCCG 1017 Query 26869 GGCG-ATCGC-CGCCGGGTGATCGGCTACGGCAACGTCGGCGACCTCGACCGGCTGTGGC 26926 | | | ||| || |||||||||||||||| |||| | |||| ||| | || |||||| Sbjct 1016 GTGGCAACGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGGC 957 Query 26927 CGCAGAAGCCGCCGGGCATCCGGCTTGTCGTCGCCGGGTACGGGCGGCTGCCGAGCTACC 26986 ||| ||||| | || | ||| |||||| ||||| || |||| | Sbjct 956 GTGTTCGCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAACCTGG 897 Query 26987 CCGGCATGATCGCGCACCAATACACGGACGGCAGCGGCTACGGCGGCGGCCTGCCCGAAG 27046 |||| |||||||||||| ||||| |||||| | || | ||||||||| || ||||||| Sbjct 896 CCGGACAGATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGAAG 837 Query 27047 GTGCACCACCGTTCGGCAACTGCGACATGAACGCTGCCAACGG 27089 | ||||| |||||||||||||||||||||||| | ||| |||| Sbjct 836 GGGCACCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGG 794 >seq156590 Length=1116 Score = 80.6 bits (88), Expect = 1e-10 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 44556 CCCGGCGGCGTCGTGCTCGACCCGTTCCACGGTTCCGGCACAACGGGTCTGGTGGCGCTC 44615 ||||||| ||| ||||||||||||||| ||| ||||||| |||||| ||||||| Sbjct 507 CCCGGCGACGTGGTGCTCGACCCGTTCTTCGGCACCGGCACGACGGGTGCGGTGGCGAAG 448 Query 44616 GGCCTCGGCCGCCGCTACGTCGGCATCGA 44644 | ||||||||| ||| |||||||||| Sbjct 447 CGGCTCGGCCGCAGCTGGATCGGCATCGA 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185110508960148