Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq61277 107 3e-18 seq76033 95.1 2e-14 >seq61277 Length=456 Score = 107 bits (118), Expect = 3e-18 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388 || || || ||||| || |||||| ||||| | |||||||| ||||||||||||||| Sbjct 268 CTCTCGTGCCAGCTGTACCAACGCTCGGCGGACGTCTTCCTCGGGGTGCCGTTCAACATC 327 Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGAT 198448 ||||| ||||| | || |||||| |||| |||||| ||| || |||||||| Sbjct 328 GCGTCCTACGCCCTGCTGGTGCACCTGGTCGCCCAGGTGGTCGGTCTGCAACCGGGCGAC 387 Query 198449 TTCATTTGGAC---GGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAG 198505 ||||| || ||||| || | || || ||||| || || || ||||||||| | Sbjct 388 TTCATCCACACCCTGGGCGATG---CGCACCTGTACTCCAACCACCTCGAGCAGGCCCGG 444 Query 198506 CTCCAGCTGAC 198516 | |||||||| Sbjct 445 TTGCAGCTGAC 455 >seq76033 Length=7108 Score = 95.1 bits (104), Expect = 2e-14 Identities = 147/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388 || || || ||||||||||| |||||||| || | |||||||| ||||||||||||||| Sbjct 6367 CTCTCCTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATC 6426 Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGAT 198448 ||||| || || | ||| |||||| | ||| ||||| | | | | || || Sbjct 6427 GCGTCCTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAG 6486 Query 198449 TTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTC 198508 ||| | ||||| ||||| ||| || ||||| || || | || |||| | | Sbjct 6487 TTCGTGTGGACCGGCGGGGACTGCCACATCTACGACAACCACGTCGACCAGGTGAGATTG 6546 Query 198509 CAGCTGACGCGTGAGCCGTTACCTTTACC 198537 ||||| ||||||| ||| |||| |||| Sbjct 6547 CAGCTCTCGCGTGACCCG-TACCCATACC 6574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 766529469121640