Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq13366 156 5e-33
seq170880 111 2e-19
>seq13366
Length=6323
Score = 156 bits (172), Expect = 5e-33
Identities = 477/729 (65%), Gaps = 24/729 (3%)
Strand=Plus/Plus
Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757
|||||| |||| || |||| ||| | |||||||| ||||| | || || | |||||
Sbjct 882 TCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTG 941
Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT 110817
||| || ||||| || ||||| || || ||||| ||| || || | ||| | | ||
Sbjct 942 TGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTT--TT 999
Query 110818 G--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTT---CCCAC 110872
| || ||| || || ||| ||||||| | || | || | || |||||
Sbjct 1000 GCTATCTTTTCTTTAAGGACAGCCCAGTCCCAA---AGGTCTGTAGGAGTTTTGTCCCAC 1056
Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932
|| ||| |||| || | |||||| || ||| || | | | || || | ||||
Sbjct 1057 ATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCT 1116
Query 110933 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 110992
| |||||| |||||||| || || || | | | | ||| || |||||||| ||
Sbjct 1117 TCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATT 1176
Query 110993 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATAC 111051
| ||| | | |||| || || | | || || ||| | ||| |
Sbjct 1177 TGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA-TATTCTCATCAACACAAACGC 1235
Query 111052 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 111111
||| || | || |||||||| | |||||||||||| |||| |||||| || || ||
Sbjct 1236 ATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGC 1295
Query 111112 AGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 111168
|||| || ||||||||||| ||||| ||| ||||| ||||| || |||||
Sbjct 1296 ---CTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAAT 1352
Query 111169 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 111228
|||||||||||| | | ||||| | ||| ||| || | | |||| ||| || |
Sbjct 1353 CTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA---ACAAACAT 1406
Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288
||| || || || || | ||||| || ||| ||||| | ||||| | |
Sbjct 1407 GTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCAC 1466
Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348
|| || || || | ||| || ||||| || || | ||| ||||| |||||||| |
Sbjct 1467 AACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCT 1526
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408
||| || |||||||| || | |||||| || || || |||||| || | || | |||
Sbjct 1527 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 1586
Query 111409 AGCCTTCCA 111417
| ||||||
Sbjct 1587 TGACTTCCA 1595
>seq170880
Length=1133
Score = 111 bits (122), Expect = 2e-19
Identities = 325/495 (66%), Gaps = 7/495 (1%)
Strand=Plus/Minus
Query 111661 GATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG---CCCAGC 111717
||| || | |||||| |||||||| |||| |||| | ||| || |||| |
Sbjct 1086 GATGTCGGGGTGCCACGGCTCAAGGTAGATGGCGAACGCACCCGGGCGCTTGTTCCCACC 1027
Query 111718 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 111777
|| | |||||||| || ||| ||| || ||||| ||||| || | || || | ||
Sbjct 1026 CTGGTCGACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCGTTCGA 967
Query 111778 TTGACCATTTGTCCCCCGAATACGAGATTTATT-GGCTCTCACATCATGGATGTGCATCC 111836
| || ||||| || | || || || ||| | | | || ||||| | |
Sbjct 966 GTATCCGTTTGTGCCACCGATGT-AGCTTCCGGAGGCACGGATGTTGTGAATGTGGAGGC 908
Query 111837 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 111896
| ||||| || || ||| ||||| || ||| | | || || | ||||| || |
Sbjct 907 CGATACCGCCGGCGGTCTTGGAGATCATGGCGCACGTCTTCAGGGTGTCGTAGATGCCCT 848
Query 111897 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 111956
||| ||||| ||||| | || | ||||||||| | | ||| || || || |
Sbjct 847 CGATCGAGTCGTCCTTCATCGCCACGAGGAAGCAAGACGCAAGCTGGGGGTGGGGCGTGC 788
Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG-GGACATCTTGTCGTAT 112015
|||||||||||||||| || | || || |||| ||| || |||||| | || |||
Sbjct 787 CAGCATTGAAGAGGGTGGGCGAGGCATGGGTGAAG-TACTTTTCGGACATGTAGTTGTAC 729
Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075
||||| | || | || | |||||||||||||| ||||| ||||||| ||||
Sbjct 728 GTCTCGATCGCACGCGTGACGTTGTTGCCGTGGATGCCGATAGCGACGCGCATGAGCATG 669
Query 112076 TACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTT 112135
| ||| ||| || || | ||| |||| || |||| ||| | |||||||||
Sbjct 668 TGCTGCGGGCGCTCGGCGACGCGGCCGTCGATGCGGAGAAGGTAGGACCGCTCAAGGGTC 609
Query 112136 TTGAGACCAAAGTAA 112150
|||| |||||||||
Sbjct 608 TTGAAGCCAAAGTAA 594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 625856787616800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |