Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq13366 123 3e-23
seq170880 89.7 6e-13
>seq13366
Length=6323
Score = 123 bits (136), Expect = 3e-23
Identities = 469/725 (65%), Gaps = 36/725 (5%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|| ||||| | || | || ||||| | ||| |||| || | ||||| || || |||
Sbjct 892 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 951
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTC 118300
|| || ||||| || || || | || || || | ||| | ||| ||| | |||
Sbjct 952 GCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTA-TCTTTTC 1010
Query 118301 CTTGAG---AGC---GTCCCA---GTC-GTAGTTGAGCTTTGTCTCCCCCTGCCACATAT 118350
|| || ||| |||||| ||| |||| ||| |||||| ||||||||
Sbjct 1011 TTTAAGGACAGCCCAGTCCCAAAGGTCTGTAG--GAGTTTTGTC--------CCACATAT 1060
Query 118351 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 118410
|| ||||||||||||||||| ||||| || | | |||| |||| || ||
Sbjct 1061 CATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTT 1120
Query 118411 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAG 118470
|| || ||||| | || || || | || | | ||| ||||||||||| || |
Sbjct 1121 TTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTT 1180
Query 118471 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 118530
||| | | || | || || | | | || ||| | ||| |||| |
Sbjct 1181 GATTGAGAAGTATTGCTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTG 1240
Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590
| | || || ||||| | ||||| || | |||||||||||| || | || ||
Sbjct 1241 CCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGC---CT 1297
Query 118591 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647
| || ||||||||||| ||| ||||| | |||| ||||| || |||| |||||
Sbjct 1298 CAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTG 1357
Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA 118707
||||||| | | |||| ||| ||| ||| | | |||| ||| || | ||
Sbjct 1358 TGATTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA---ACAAACATGTTAA 1411
Query 118708 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767
| || || || || || || ||||| | ||||| | |||||| | | || |
Sbjct 1412 GTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCT 1471
Query 118768 CCGTGCACAAGTTTG-AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826
| ||||| ||| ||| || ||||| ||||| | || |||||||| |||| |||||
Sbjct 1472 CAGTGCA-AAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTA 1530
Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886
|| |||||||| || | ||||||||| || || |||||| ||||| | | ||| | |
Sbjct 1531 CAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGAC 1590
Query 118887 TTCCA 118891
|||||
Sbjct 1591 TTCCA 1595
>seq170880
Length=1133
Score = 89.7 bits (98), Expect = 6e-13
Identities = 246/368 (67%), Gaps = 8/368 (2%)
Strand=Plus/Minus
Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246
||| |||||| ||||| | |||||| ||| || || || ||||| || | ||| ||
Sbjct 1031 CCACCCTGGTCGACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCG 972
Query 119247 TCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTGACATCGTGGATGT 119304
| || | || ||||| || | || || ||| | || | || | ||| ||||
Sbjct 971 TTCGAGTATCCGTTTGTGCCACCGATGT-AG-CTTCCGGAGGCACGGATGTTGTGAATGT 914
Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364
| | || ||||| || || ||| ||||| |||||| | | || || ||||||
Sbjct 913 GGAGGCCGATACCGCCGGCGGTCTTGGAGATCATGGCGCACGTCTTCAGGGTGTCGTAGA 854
Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424
| || ||||||||||| |||| | || | ||||||||| || | || || ||
Sbjct 853 TGCCCTCGATCGAGTCGTCCTTCATCGCCACGAGGAAGCAAGACGCAAGCTGGGGGTGGG 794
Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTG 119483
| || ||||| |||||||| || || | || ||| |||| ||| || |||||| | |
Sbjct 793 GCGTGCCAGCATTGAAGAGGGTGGGCGAGGCATGGGTGAA-GTACTTTTCGGACATGTAG 735
Query 119484 TCGTAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542
| ||| ||||| | | ||| | | || | ||||| || ||||| | ||| |||||
Sbjct 734 TTGTACGTCTCGATCGCACGCGTG-ACGTTGTTGCCGTGGATGCCGATAGCGACGCGCAT 676
Query 119543 AAACATGT 119550
| |||||
Sbjct 675 GAGCATGT 668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 616293226493480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |