Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq13366 131 2e-25 seq216741 96.9 4e-15 >seq13366 Length=6323 Score = 131 bits (144), Expect = 2e-25 Identities = 360/548 (66%), Gaps = 14/548 (3%) Strand=Plus/Minus Query 104711 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTC 104770 ||| | ||||| |||||||| || ||||| ||||| || || || |||| |||| Sbjct 1772 GCTTTATGGATACCAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTC 1713 Query 104771 TTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTT 104830 | ||||| | | ||||| ||| | || | | || ||||| ||||||| || Sbjct 1712 ATGTGTCCTCATGATTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTA 1653 Query 104831 TACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG-GTGCCAGCTGCCGATGTGTG 104889 || | || || || |||||| || | | || || |||| || | || Sbjct 1652 TATGCCAAATATGAAGAAGAAAAACGATTTA-TAAAACAAGTCAGAGCTCAAGAGTTATG 1594 Query 104890 GAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGC 104949 ||| | ||| | | | ||| ||||||||||||||||||||| | || || || || Sbjct 1593 GAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGC 1534 Query 104950 CTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTAC 105009 |||||| ||||||||||||||| ||| | || || || || |||||| || || Sbjct 1533 TTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCAC 1474 Query 105010 AGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGC 105069 || | || ||| || ||||||| ||| ||||| ||||| || || || || Sbjct 1473 TGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGC 1414 Query 105070 TCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGT 105129 || || || ||| || | || | |||| ||| | ||||| | | ||| | Sbjct 1413 ACTTAACATGTTTGT------TGAAAATAACAGATTTAATTTTAAAAAATTAAAAGAAAT 1360 Query 105130 TACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT--- 105186 || || | ||| || |||| |||||| |||||||||| |||||||| || || Sbjct 1359 CACAAAGATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTCCC 1300 Query 105187 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCT 105246 |||| || | || ||||||||||| | || |||||| | ||||||||||| | Sbjct 1299 TGAG---GCAAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGCAT 1243 Query 105247 CGCGGATG 105254 || |||| Sbjct 1242 GGCAGATG 1235 >seq216741 Length=856 Score = 96.9 bits (106), Expect = 4e-15 Identities = 240/357 (67%), Gaps = 8/357 (2%) Strand=Plus/Plus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| |||||||| |||||||| || || ||| || || ||||| | ||| ||| Sbjct 399 TTGATGATGAGACCTTTGATGTGTGAGCCATCGAAGTCCTGGTCAGTCATCACCATCAGA 458 Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279 ||||| || || | ||| | || | || || ||||| | ||||||||| Sbjct 459 GATCCATAACGGAGAGAGTCGACAGATGTGTACTTTTTTCCTTGTTGCAATCCCAAGATC 518 Query 169280 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGA-CAGAG---GCATCGCG 169335 | |||| | |||||| ||| ||| | | ||||| | ||| || | || || || Sbjct 519 TGTTTGATGT-GTTGAA-TCTCGGTATTGT-TGAGCAAT-TGAGCACCGCTAGCTTCCCG 574 Query 169336 AACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGA 169395 |||||| | || ||||| | |||||||| || || | |||||||| || | Sbjct 575 CACATTCAAAAGTTTGCCACGCAATGGGAAGACTCCATAATTGTCACGACCCACCATACC 634 Query 169396 GAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTT 169455 | || || || || | | |||| ||||||||||||||||| | |||||| || ||||| Sbjct 635 TATGCCAGCTACAGCCAAACTCTTTGCCGAGTCACCCTCGGTAAGGATGAGAGTGCATTT 694 Query 169456 TCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAAT 169512 || | | ||| ||||| || || ||||| || | |||| ||| ||||| || Sbjct 695 GTGCGAATTTCTCGTCCCCGCGTTATTGGCATCTTCAAGTTTGACAATTCCAGTGAT 751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581240654346920