Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028449.1
Length=63569
Score E
Sequences producing significant alignments: (Bits) Value
seq67190 122 4e-23
>seq67190
Length=2338
Score = 122 bits (134), Expect = 4e-23
Identities = 386/584 (66%), Gaps = 31/584 (5%)
Strand=Plus/Plus
Query 2928 TCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCC 2987
|| |||| || || || |||||||| ||| ||| || |||||| ||||| || | |
Sbjct 1440 TCGATGACGAAGGCGACGTAGACGAACCCCGCCCAAGTTGCGACGTAGGTAAAGTCCGAC 1499
Query 2988 ACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGGTTTACGCGGTCGCCTGCGGCA 3047
||||||||| || || | || |||||| ||||| ||| | |||| ||||
Sbjct 1500 ACCCACAGCATGTTCGGCGCTGGGGCGTAGAACTGCCGGTTGACGTGATCGC--GCGGGC 1557
Query 3048 ACGGC-----TTTCCGGCTGATGGTCGTACGGACCTTTTTACCCCGGAGAACACCGGCAA 3102
||||| ||| |||||||||||| || ||| || || |||| || || || |
Sbjct 1558 ACGGCGCCGCTTTATCGCTGATGGTCGTGCGCACCGGCTTGCCGCGGATTACCCCCGCCA 1617
Query 3103 GTCCCATAACCGCCATGAGACGTGCCACTGTACATCTGGCCACCCTGATTCCTTCCCGTA 3162
||||| | ||| || ||| |||| ||||| | || ||| | || ||||| |
Sbjct 1618 AGCCCATCTCGCGCATCAGCCGTTCCACGGTACAGCGCGCGACCGCAAAGCCCTCCCGCA 1677
Query 3163 ACAACTGACGCCAGACTTTACGCACACCGTACACC-TGATGATTTTCATCGTATACGCGC 3221
|| ||| |||||||| || ||||| ||||| ||| || | || || || |||||||
Sbjct 1678 TCATCTGCCGCCAGACCTTGCGCACGCCGTAGACCGCGAAG-TTCTCCGCGAATACGCGA 1736
Query 3222 TGTATCTCTCTCTTCAG--CCAGTCGTCGTGCTGCGCACGGGC--ACTGCGTTTATCCGG 3277
||||| |||| || ||| || | |||| || || || | || ||
Sbjct 1737 GCGATCTCGGTCTTGAGGATCAG--ATCCTCACGCGCCCGTGCCGACAGACGCGAT--GG 1792
Query 3278 ATGATGTCGCTGTTGCTGAC--AATGGTAATACGTTGACGGGGCAATATGCAGTTCGCTG 3335
|| |||||||| || ||| | ||| || || || ||||| || |||| | | |
Sbjct 1793 ATCCTGTCGCTG-CGC-GACGTGCTCGTAGTAGGTGGATGGGGCGATCGGCAGGACACGG 1850
Query 3336 CATACCGGTCCGACCCCGTACTGCTCACGCAGCTTATCCAGCAGTGGCATCATTTTTTCC 3395
|| | ||| ||||||| || || || | | || | | | |||| | ||
Sbjct 1851 CAGATCGGCTCGACCCCATAGGCATCGCGGTGATCGTCAATGAAAGCGATCA---TCGCC 1907
Query 3396 AGA---GGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGATATCGT 3452
|| ||||||||| |||||||| ||| ||||| || || |||| ||| ||||| ||||
Sbjct 1908 GGAACGGGCGGTCGAGCTCCGCCTGCGCGAAATATGCCGATGCCTTGCGCAGGATTTCGT 1967
Query 3453 T--ACTGCGGCGCAGTTCACGATTTTCACGTTCCAGCTCTTTCA 3494
| |||| |||||||| || || ||||||||| | ||||
Sbjct 1968 TGGCCTGC--CGCAGTTCGCGGACCTCGCGTTCCAGCGCCTTCA 2009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 202609479763390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |