Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028449.1 Length=63569 Score E Sequences producing significant alignments: (Bits) Value seq67190 122 4e-23 >seq67190 Length=2338 Score = 122 bits (134), Expect = 4e-23 Identities = 386/584 (66%), Gaps = 31/584 (5%) Strand=Plus/Plus Query 2928 TCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCC 2987 || |||| || || || |||||||| ||| ||| || |||||| ||||| || | | Sbjct 1440 TCGATGACGAAGGCGACGTAGACGAACCCCGCCCAAGTTGCGACGTAGGTAAAGTCCGAC 1499 Query 2988 ACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGGTTTACGCGGTCGCCTGCGGCA 3047 ||||||||| || || | || |||||| ||||| ||| | |||| |||| Sbjct 1500 ACCCACAGCATGTTCGGCGCTGGGGCGTAGAACTGCCGGTTGACGTGATCGC--GCGGGC 1557 Query 3048 ACGGC-----TTTCCGGCTGATGGTCGTACGGACCTTTTTACCCCGGAGAACACCGGCAA 3102 ||||| ||| |||||||||||| || ||| || || |||| || || || | Sbjct 1558 ACGGCGCCGCTTTATCGCTGATGGTCGTGCGCACCGGCTTGCCGCGGATTACCCCCGCCA 1617 Query 3103 GTCCCATAACCGCCATGAGACGTGCCACTGTACATCTGGCCACCCTGATTCCTTCCCGTA 3162 ||||| | ||| || ||| |||| ||||| | || ||| | || ||||| | Sbjct 1618 AGCCCATCTCGCGCATCAGCCGTTCCACGGTACAGCGCGCGACCGCAAAGCCCTCCCGCA 1677 Query 3163 ACAACTGACGCCAGACTTTACGCACACCGTACACC-TGATGATTTTCATCGTATACGCGC 3221 || ||| |||||||| || ||||| ||||| ||| || | || || || ||||||| Sbjct 1678 TCATCTGCCGCCAGACCTTGCGCACGCCGTAGACCGCGAAG-TTCTCCGCGAATACGCGA 1736 Query 3222 TGTATCTCTCTCTTCAG--CCAGTCGTCGTGCTGCGCACGGGC--ACTGCGTTTATCCGG 3277 ||||| |||| || ||| || | |||| || || || | || || Sbjct 1737 GCGATCTCGGTCTTGAGGATCAG--ATCCTCACGCGCCCGTGCCGACAGACGCGAT--GG 1792 Query 3278 ATGATGTCGCTGTTGCTGAC--AATGGTAATACGTTGACGGGGCAATATGCAGTTCGCTG 3335 || |||||||| || ||| | ||| || || || ||||| || |||| | | | Sbjct 1793 ATCCTGTCGCTG-CGC-GACGTGCTCGTAGTAGGTGGATGGGGCGATCGGCAGGACACGG 1850 Query 3336 CATACCGGTCCGACCCCGTACTGCTCACGCAGCTTATCCAGCAGTGGCATCATTTTTTCC 3395 || | ||| ||||||| || || || | | || | | | |||| | || Sbjct 1851 CAGATCGGCTCGACCCCATAGGCATCGCGGTGATCGTCAATGAAAGCGATCA---TCGCC 1907 Query 3396 AGA---GGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGATATCGT 3452 || ||||||||| |||||||| ||| ||||| || || |||| ||| ||||| |||| Sbjct 1908 GGAACGGGCGGTCGAGCTCCGCCTGCGCGAAATATGCCGATGCCTTGCGCAGGATTTCGT 1967 Query 3453 T--ACTGCGGCGCAGTTCACGATTTTCACGTTCCAGCTCTTTCA 3494 | |||| |||||||| || || ||||||||| | |||| Sbjct 1968 TGGCCTGC--CGCAGTTCGCGGACCTCGCGTTCCAGCGCCTTCA 2009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 202609479763390