Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028687.1 Length=51637 Score E Sequences producing significant alignments: (Bits) Value seq4597 100 9e-17 >seq4597 Length=157418 Score = 100 bits (110), Expect = 9e-17 Identities = 241/359 (67%), Gaps = 17/359 (5%) Strand=Plus/Plus Query 35354 GAGTAGTTCGCACCGACACCGCCGCCCTCCATGAGGCGCATGAACGTGA---ACTCGAAG 35410 |||||||| || ||||||||||||||||| | || || | ||| || ||| |||| Sbjct 124971 GAGTAGTTGGCGCCGACACCGCCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAG 125027 Query 35411 TGATCCGAGGGCTTCTCGGTCCACCCGCTCACCCAGCAGTTGAAGAGGTGCTGGGCGTTC 35470 || || || ||| | | ||| ||| || | |||||| ||| ||| Sbjct 125028 TGGTCACTGGTCTTTGCCGACCATCCGGAGACGAAACAGTTGC-GAGAGAACGGG----- 125081 Query 35471 TTCACG---CCGCTGGCCCACAGGTGACGGCCTGCCGGAAGCATCTTGAACTCGGTGATG 35527 |||||| ||| || |||||||||| || || ||||| ||||||||||| | | ||| Sbjct 125082 TTCACGGTTCCGGTGACCCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATC 125141 Query 35528 AGCCGGATCAGCTCTTCCCGTTCACCTGGCTGCT-GGTACCGCGCATCCACCAGCGCGAG 35586 || || || || || || || || || ||| | | ||| | || Sbjct 125142 AGGTCGAACAAATCCTCACGCTCGTTCGGGAGCCAGGTTGAGGACGGGACGTAGCCC-AG 125200 Query 35587 GTTCCCGTCGACCACACGCTCGACCGTCTCGGGCCAGGTCTCGGACGAGCCGTCAGGCTT 35646 ||| |||||||||||||| ||| |||||| ||| ||||| || ||||||||||| Sbjct 125201 GTTGCCGTCGACCACACGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGGCTT 125260 Query 35647 CACCCGTGAGTAGGTCCGGTTGTAGACGATCTCGCCGGTCGGTCCCCAGTTGACTTCCG 35705 | || ||||||||||| ||| || || |||| |||||||||| | | ||||| Sbjct 125261 GATGCGACTGTAGGTCCGGTCGTATACCTCCTTGCCGATCGGTCCCCACTGGGGTTCCG 125319 Score = 87.8 bits (96), Expect = 6e-13 Identities = 134/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 34789 GAACAGGTCGTCCACGATGACCGAGATGTTGGTCGTCCAGTGCTTG--CCGGTCTCCTGC 34846 |||| ||||||| || ||| |||||||| || |||||||| || || ||| | | Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGC--C 124469 Query 34847 TTGCAGCGGACGAACTCCTCGATCTGAGGGTCCTGCCAGTGCATCATCGACATGCGAGCC 34906 |||||| || ||| || || | ||||| | |||| |||||| | ||| || || Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529 Query 34907 GACCGGCGAACACCGCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCT 34966 ||||| || |||| || || || || | ||||||| |||||||||||| ||| || Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCC 124589 Query 34967 GCGATCCCG 34975 |||| ||| Sbjct 124590 TCGATGCCG 124598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164573506182754