Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028687.1
Length=51637
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 100 9e-17
>seq4597
Length=157418
Score = 100 bits (110), Expect = 9e-17
Identities = 241/359 (67%), Gaps = 17/359 (5%)
Strand=Plus/Plus
Query 35354 GAGTAGTTCGCACCGACACCGCCGCCCTCCATGAGGCGCATGAACGTGA---ACTCGAAG 35410
|||||||| || ||||||||||||||||| | || || | ||| || ||| ||||
Sbjct 124971 GAGTAGTTGGCGCCGACACCGCCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAG 125027
Query 35411 TGATCCGAGGGCTTCTCGGTCCACCCGCTCACCCAGCAGTTGAAGAGGTGCTGGGCGTTC 35470
|| || || ||| | | ||| ||| || | |||||| ||| |||
Sbjct 125028 TGGTCACTGGTCTTTGCCGACCATCCGGAGACGAAACAGTTGC-GAGAGAACGGG----- 125081
Query 35471 TTCACG---CCGCTGGCCCACAGGTGACGGCCTGCCGGAAGCATCTTGAACTCGGTGATG 35527
|||||| ||| || |||||||||| || || ||||| ||||||||||| | | |||
Sbjct 125082 TTCACGGTTCCGGTGACCCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATC 125141
Query 35528 AGCCGGATCAGCTCTTCCCGTTCACCTGGCTGCT-GGTACCGCGCATCCACCAGCGCGAG 35586
|| || || || || || || || || ||| | | ||| | ||
Sbjct 125142 AGGTCGAACAAATCCTCACGCTCGTTCGGGAGCCAGGTTGAGGACGGGACGTAGCCC-AG 125200
Query 35587 GTTCCCGTCGACCACACGCTCGACCGTCTCGGGCCAGGTCTCGGACGAGCCGTCAGGCTT 35646
||| |||||||||||||| ||| |||||| ||| ||||| || |||||||||||
Sbjct 125201 GTTGCCGTCGACCACACGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGGCTT 125260
Query 35647 CACCCGTGAGTAGGTCCGGTTGTAGACGATCTCGCCGGTCGGTCCCCAGTTGACTTCCG 35705
| || ||||||||||| ||| || || |||| |||||||||| | | |||||
Sbjct 125261 GATGCGACTGTAGGTCCGGTCGTATACCTCCTTGCCGATCGGTCCCCACTGGGGTTCCG 125319
Score = 87.8 bits (96), Expect = 6e-13
Identities = 134/189 (71%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 34789 GAACAGGTCGTCCACGATGACCGAGATGTTGGTCGTCCAGTGCTTG--CCGGTCTCCTGC 34846
|||| ||||||| || ||| |||||||| || |||||||| || || ||| | |
Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGC--C 124469
Query 34847 TTGCAGCGGACGAACTCCTCGATCTGAGGGTCCTGCCAGTGCATCATCGACATGCGAGCC 34906
|||||| || ||| || || | ||||| | |||| |||||| | ||| || ||
Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529
Query 34907 GACCGGCGAACACCGCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCT 34966
||||| || |||| || || || || | ||||||| |||||||||||| ||| ||
Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCC 124589
Query 34967 GCGATCCCG 34975
|||| |||
Sbjct 124590 TCGATGCCG 124598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164573506182754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |