Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028757.1
Length=50768
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 159 1e-34
seq47396 80.6 9e-11
>seq4597
Length=157418
Score = 159 bits (176), Expect = 1e-34
Identities = 600/921 (65%), Gaps = 54/921 (6%)
Strand=Plus/Plus
Query 34884 GTCGACCTCCACCGAGATGTTCGTCGTCCAGTGCG---ACCCGGTGTCGGCCTTGATCCC 34940
||| ||||| || ||||||||||| |||||||| | ||| | |||||||||
Sbjct 124421 GTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAG---TCGGCCTTGCAGTT 124477
Query 34941 GACGAACCGGTCGATCTGCGGGTCGTTCCAGTGCATCATCGCCATGCGAGCCGAGCGGCG 35000
|| ||| | || | |||||||| |||| |||||| ||||| || || || || ||
Sbjct 124478 GATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACG 124537
Query 35001 AACGCCGCCAGCGACCACACACTGCGCGATGGCGTGGTCGATCCCCATCGCCGAGATCCC 35060
| || || ||||| || | ||||||| ||||||||||| ||| ||| ||| ||
Sbjct 124538 TGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCC 124597
Query 35061 GTCCAGGCGCTCCCCGTCGTGGGCGATCTCGCTGAGG--ATCTCGCATAC-GTCGATCAG 35117
| |||| | ||| || | || | ||||| ||| || | | | |||
Sbjct 124598 GGTCAGGTGACGGCCG--GTTG----CCTTGTTGAGGGTGTCTGTGATGCTGACAATCGA 124651
Query 35118 CATCCGAGCCAGAGGCAGCGGCCCCGAGGCCGTGCCGCCGAACGTCTTCAGCTTCGCGCC 35177
|| |||| ||| || || || || || || ||||| ||||||| | ||||
Sbjct 124652 TGTC---GCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGCC 124708
Query 35178 GAACTGACGGACCCGAGACACGTCGTAGACGCGCTGGAAGTGGCTGACCTCATCCCGGTA 35237
| | ||| |||| |||| ||||| | ||| || |||| | ||||
Sbjct 124709 GTGTCCTCTGACATCGGACAGGTCGAAGACG---AGTCCGTGCATGCCCTCTT--CGGTC 124763
Query 35238 GTGGGTGTCGATCAGGTCCACCAGAGCAGCGGCCCAGCCCTCTCGGGAGTCCTCCACG-- 35295
| ||||| |||||||||| | || ||| ||||||||| |||| ||||||||||
Sbjct 124764 G-ACGTGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGAC 124822
Query 35296 ATGAACGCACCAGCCCAGTCGGGGTCGTACTCCGTCGACAGGACGCCGGC---CTCCTTC 35352
|||| || ||| | || || | | ||| | ||||| ||| || ||||||
Sbjct 124823 ATGAGTGCGGCAG--CTTTCCGGCGCCTTGTCCATGAACAGGCTGCCTGCCTGCTCCTTG 124880
Query 35353 ATCGCCTCGTAGTCCGGGTGGTCCGGGTCGCAGACGATGTGGACGTACAGCTCCTGCTGA 35412
| || ||||||||||||| | | || | || | ||| |||| |||| |
Sbjct 124881 GTTGCTGCGTAGTCCGGGTGAGACTCGGCGATGGTGACGCCCACGAACAG--GCTGCCCA 124938
Query 35413 ACCTCCGCGTAGTCGGCCAGGAATCGGTTC---GAGTAGTTCGCCCCGACGCCGCCGCCC 35469
|| || ||| |||| || ||| | |||||||| || ||||| |||||||||
Sbjct 124939 GGATCGGCTGAGT-GGCCTTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCGCCGCCC 124997
Query 35470 TCCATGAGCCGCATGAACG---TGAACTCGAAGTGGTCCGAGGGCTTCGGCCCCCAGCCC 35526
|| | || || | ||| ||||| ||||||||| || ||| | | ||| ||
Sbjct 124998 TCGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGACCATCCG 125054
Query 35527 GAGACCCAGCAGTTGAAGAGGTGCTGGGCGTTCTTCACG---CCTGACGCCCACAGGTGG 35583
||||| | |||||| ||| ||| |||||| || | |||||||||||
Sbjct 125055 GAGACGAAACAGTTG-CGAGAGAACGGG-----TTCACGGTTCCGGTGACCCACAGGTGG 125108
Query 35584 CGTCCACCGGGGAGGATCTTGAAGTCCTCCATCAGCCGGATCAGATCCTCGCGCTCACCG 35643
||||| | ||||| |||||||||| | ||||| || || |||||| |||||
Sbjct 125109 CGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCGTTC 125168
Query 35644 TCGAG-GTGGTAGCGCTCGTCCACCAGCGCCAGGTTCCCGTCGACCACGCGCCGCACCGT 35702
||| ||| | | || ||| ||||||| ||||||||||| || || ||
Sbjct 125169 GGGAGCCAGGTTGAGGACGGGACGTAGC-CCAGGTTGCCGTCGACCACACGTGAGACGGT 125227
Query 35703 TTCCGGCCAGGTCTCCTTAGACCCGTCGGGCTTGGTCCGGGAGTAGGTCCGGTTGTAGAC 35762
|| ||| |||||||| | ||||| |||||| | || ||||||||||| ||| ||
Sbjct 125228 CTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTATAC 125287
Query 35763 CAGCTCCCCTGTCGGTCCCCA 35783
| || || ||||||||||
Sbjct 125288 CTCCTTGCCGATCGGTCCCCA 125308
>seq47396
Length=7053
Score = 80.6 bits (88), Expect = 9e-11
Identities = 61/71 (86%), Gaps = 1/71 (1%)
Strand=Plus/Plus
Query 3847 CATAGGCACGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTC 3906
|| ||| |||||||||| ||| ||||||||||||||||||| |||| || |||||||||
Sbjct 4050 CAGAGGGGCGTAGCTCAACTGG-CAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTC 4108
Query 3907 GAGTCCTGCCG 3917
||||||| ||
Sbjct 4109 AAGTCCTGTCG 4119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 161801856017580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |