Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq2386 111 6e-20 seq224441 84.2 8e-12 >seq2386 Length=6545 Score = 111 bits (122), Expect = 6e-20 Identities = 127/168 (76%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 6082 GAGGTCGCCCCGCTGGCCTACATGCGAGGCCGGACGTTCAACGACACGTACATCGTCGCT 6141 |||||||| ||||||||||||||||| |||||||| |||||||| ||| |||| || Sbjct 5345 GAGGTCGCGCCGCTGGCCTACATGCGTGGCCGGACCCTCAACGACGCGTTCATCATCCTC 5286 Query 6142 GACGAGATGCAGAACGCCAC-CCCGCGCCAGACCGCGCTGCTGGTGACCCGCCTGGGCTT 6200 |||||| ||||||| |||| |||| | |||| | || | ||||||| || ||||| Sbjct 5285 GACGAGGCGCAGAACACCACGCCCGAG-CAGATGAAGATGTTCCTGACCCGGCTCGGCTT 5227 Query 6201 CGGGACGAAGGCCGTCCTGAACGGTGACCCGGCCCAGTGCGACCTGCC 6248 ||| | |||| |||| | | ||| ||| ||||| |||||||| Sbjct 5226 CGGTTCCAAGGTCGTCGTCACCGGCGACGTCACCCAGGTGGACCTGCC 5179 >seq224441 Length=752 Score = 84.2 bits (92), Expect = 8e-12 Identities = 153/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 5944 GAGGCAGATGAGAAGCTCGGCTTCCTGCCCGGCACTGTGGACGAGAAGATGGCACCCTAC 6003 ||||| | ||| ||||||||||||||||||||| || ||| ||||| | || || Sbjct 241 GAGGCGGGGGAGCGGCTCGGCTTCCTGCCCGGCACGCTGACCGACAAGATCGACCCGTAT 300 Query 6004 CTCACCCCGATGCTGGACGCGGTGATCGACCTGGTCGGCCCGACGAT---GACGAAGCGC 6060 || |||| | |||||| | | ||| || | | ||| | | | |||||| Sbjct 301 CTGCGCCCGCTCTACGACGCGCTCAACGAGATGATGGATCCGGAGCTCGTGCCGAAGC-- 358 Query 6061 CTCCTCGAGTCGCGCCAGC-TGGAGGTCGCCCCGCTGGCCTACATGCGAGGCCGGACGTT 6119 | |||| | | || || | | |||||||| ||||| ||||||||||| ||||| || | Sbjct 359 -TGCTCGCGAC-CGGCACCGTCGAGGTCGCGCCGCTCGCCTACATGCGCGGCCGCACCCT 416 Query 6120 CAACGACACGTACATCGTCGCTGACGAGATGCAGAACGCC 6159 |||| || | | | ||||| |||||| ||||||| || Sbjct 417 CAACAACGCCTTCGTCGTCCTCGACGAGGCGCAGAACACC 456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190857935424640