Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028770.1
Length=59878
Score E
Sequences producing significant alignments: (Bits) Value
seq2386 111 6e-20
seq224441 84.2 8e-12
>seq2386
Length=6545
Score = 111 bits (122), Expect = 6e-20
Identities = 127/168 (76%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 6082 GAGGTCGCCCCGCTGGCCTACATGCGAGGCCGGACGTTCAACGACACGTACATCGTCGCT 6141
|||||||| ||||||||||||||||| |||||||| |||||||| ||| |||| ||
Sbjct 5345 GAGGTCGCGCCGCTGGCCTACATGCGTGGCCGGACCCTCAACGACGCGTTCATCATCCTC 5286
Query 6142 GACGAGATGCAGAACGCCAC-CCCGCGCCAGACCGCGCTGCTGGTGACCCGCCTGGGCTT 6200
|||||| ||||||| |||| |||| | |||| | || | ||||||| || |||||
Sbjct 5285 GACGAGGCGCAGAACACCACGCCCGAG-CAGATGAAGATGTTCCTGACCCGGCTCGGCTT 5227
Query 6201 CGGGACGAAGGCCGTCCTGAACGGTGACCCGGCCCAGTGCGACCTGCC 6248
||| | |||| |||| | | ||| ||| ||||| ||||||||
Sbjct 5226 CGGTTCCAAGGTCGTCGTCACCGGCGACGTCACCCAGGTGGACCTGCC 5179
>seq224441
Length=752
Score = 84.2 bits (92), Expect = 8e-12
Identities = 153/220 (70%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 5944 GAGGCAGATGAGAAGCTCGGCTTCCTGCCCGGCACTGTGGACGAGAAGATGGCACCCTAC 6003
||||| | ||| ||||||||||||||||||||| || ||| ||||| | || ||
Sbjct 241 GAGGCGGGGGAGCGGCTCGGCTTCCTGCCCGGCACGCTGACCGACAAGATCGACCCGTAT 300
Query 6004 CTCACCCCGATGCTGGACGCGGTGATCGACCTGGTCGGCCCGACGAT---GACGAAGCGC 6060
|| |||| | |||||| | | ||| || | | ||| | | | ||||||
Sbjct 301 CTGCGCCCGCTCTACGACGCGCTCAACGAGATGATGGATCCGGAGCTCGTGCCGAAGC-- 358
Query 6061 CTCCTCGAGTCGCGCCAGC-TGGAGGTCGCCCCGCTGGCCTACATGCGAGGCCGGACGTT 6119
| |||| | | || || | | |||||||| ||||| ||||||||||| ||||| || |
Sbjct 359 -TGCTCGCGAC-CGGCACCGTCGAGGTCGCGCCGCTCGCCTACATGCGCGGCCGCACCCT 416
Query 6120 CAACGACACGTACATCGTCGCTGACGAGATGCAGAACGCC 6159
|||| || | | | ||||| |||||| ||||||| ||
Sbjct 417 CAACAACGCCTTCGTCGTCCTCGACGAGGCGCAGAACACC 456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190857935424640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |