Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028794.1 Length=52647 Score E Sequences producing significant alignments: (Bits) Value seq4597 86.0 2e-12 >seq4597 Length=157418 Score = 86.0 bits (94), Expect = 2e-12 Identities = 590/927 (64%), Gaps = 66/927 (7%) Strand=Plus/Plus Query 35178 GTCGACCTCGACCGAGATGTTCGTCGTCCAGT--GCTCACCAGAGGTGGACTTGATGTGG 35235 ||| |||||||| ||||||||||| ||||||| | ||| || || |||| || | Sbjct 124421 GTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACC--AGTCGGCCTTGCAGTTG 124478 Query 35236 ATGAACTCCTCGACCTGCGAGTCCCGCCAGTGCATCATCGACATCCGCGCCGACCGGCGC 35295 ||||| || ||| | || ||| |||| |||||| | ||| ||||| ||||| || Sbjct 124479 ATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGT 124538 Query 35296 ACACCGCCGGCCACCACGCACGAAGCGATCGCGTGATCGATGGCCATCGCATCTAGCCCG 35355 |||| || || || ||| | | ||||| |||| ||||| ||| || || | ||| Sbjct 124539 GCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCG 124598 Query 35356 GTCA----TCGGCCTGTTGCGGAACGCCAGCTCGCTGAAGATGTCGGACACCTTCTTGAG 35411 |||| ||||| ||||| || | ||| | |||| | | | ||| Sbjct 124599 GTCAGGTGACGGCCGGTTGC----------CTTGTTGAGGGTGTCTGTGA---TGCTGAC 124645 Query 35412 CATC--TG-AGCGAACGGCAGTGGGCCGCTGGCCTTTCCGCCGAACGTCTTGAGCTTGGC 35468 ||| || || || || |||||| || |||| ||||| ||||| | | || Sbjct 124646 AATCGATGTCGCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAAC--GGT 124703 Query 35469 TCCCTCTGGCC---GAACCCGTGACACGTCGTAGACCCGGTTGAAGTGGCTGACCTCGTC 35525 | | || || || || |||| |||| |||| | ||| || |||| | Sbjct 124704 ACGCCGTGTCCTCTGACATCG-GACAGGTCGAAGAC---GAGTCCGTGCATGCCCTCTT- 124758 Query 35526 CCGGTAGTGGGTGTCGATCAGGTCGGTCAGGGCTGCCGCCCATCCCTCACGCGAGTCCTC 35585 |||| | ||||| |||||||| | ||||| |||| |||| || | |||||| Sbjct 124759 -CGGTCG-ACGTGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTC 124816 Query 35586 GACCTCGTAGGCACCGACCCAGTCGGGGTCGTATTCGGTCGACAGGATGCCTGC---CGC 35642 || | | | | | | || || | | || | ||||| ||||||| | | Sbjct 124817 CACGACATGAGTGCGGCAGCTTTCCGGCGCCTTGTCCATGAACAGGCTGCCTGCCTGCTC 124876 Query 35643 CTTCATCGCCTCGTAGTCCGGGTGGTCCGGGTCGCACACGATGTGGACGTACA-GATCCT 35701 ||| | || ||||||||||||| | ||| ||||| |||| || || | Sbjct 124877 CTTGGTTGCTGCGTAGTCCGGGTG---AGACTCG---GCGATGGTGACGCCCACGAACAG 124930 Query 35702 GAAGCACCGGCCCG---TAGTGGCC--GAGGTAGTGGTTCGAGTAGTTCGCCCCGACTCC 35756 | || | || || ||||||| || ||| | |||||||| || ||||| || Sbjct 124931 GCTGCCCAGGATCGGCTGAGTGGCCTTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACC 124990 Query 35757 CCCGCCTTCCATCAGGCGCAGGA-ACG-TGAAAGAGAAGTGGTCCGAGGGCTTCTCGGTC 35814 ||||| || | ||| || ||| || ||| ||||||||| || ||| | | | Sbjct 124991 GCCGCCCTCGAACAGACG--GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGAC 125048 Query 35815 CACCCTGCCACCCAGCAGTTGAACAGGTGCTGGGCGTTCCGCACG---CCGCTGGCCCAG 35871 || || | || | |||||| | | | || ||| |||| ||| || |||| Sbjct 125049 CATCCGGAGACGAAACAGTTG--CGAGAGAACGG-GTT---CACGGTTCCGGTGACCCAC 125102 Query 35872 AGGTGACGACCGGCCGGGAGGATCTTGAACTCCGACATCAGTCGGATGAGTTCGGCTCGC 35931 ||||| || ||||||||||| |||||||| | | ||||| || | || | ||| Sbjct 125103 AGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGC 125162 Query 35932 TCATCAGGTAG-CTGATACCGAACGTCAACGAGTCCCAGATTGCCATCGACCACTCGCTC 35990 || | || || | | | | ||| ||| ||||| ||||| |||||||| || Sbjct 125163 TCGTTCGGGAGCCAGGTTGAGGACG-GGACGTAGCCCAGGTTGCCGTCGACCACACGTGA 125221 Query 35991 GACGGTCTCGGGCCAGGTCTCCTTGGAGCCGTCTGGCTTGGTTCGTGCGTAGGTGCGCTC 36050 |||||||||| ||| |||||||| | ||||| |||||| | || |||||| || || Sbjct 125222 GACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTC 125281 Query 36051 ATACACCAGCTTTCCCGTTGGCCCCCA 36077 || ||| ||| || | || ||||| Sbjct 125282 GTATACCTCCTTGCCGATCGGTCCCCA 125308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167794871737214