Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028798.1
Length=50882
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 159 1e-34
seq47396 80.6 9e-11
>seq4597
Length=157418
Score = 159 bits (176), Expect = 1e-34
Identities = 600/921 (65%), Gaps = 54/921 (6%)
Strand=Plus/Plus
Query 35000 GTCGACCTCCACCGAGATGTTCGTCGTCCAGTGCG---ACCCGGTGTCGGCCTTGATCCC 35056
||| ||||| || ||||||||||| |||||||| | ||| | |||||||||
Sbjct 124421 GTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAG---TCGGCCTTGCAGTT 124477
Query 35057 GACGAACCGGTCGATCTGCGGGTCGTTCCAGTGCATCATCGCCATGCGAGCCGAGCGGCG 35116
|| ||| | || | |||||||| |||| |||||| ||||| || || || || ||
Sbjct 124478 GATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACG 124537
Query 35117 AACGCCGCCAGCGACCACACACTGCGCGATGGCGTGGTCGATCCCCATCGCCGAGATCCC 35176
| || || ||||| || | ||||||| ||||||||||| ||| ||| ||| ||
Sbjct 124538 TGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCC 124597
Query 35177 GTCCAGGCGCTCCCCGTCGTGGGCGATCTCGCTGAGG--ATCTCGCATAC-GTCGATCAG 35233
| |||| | ||| || | || | ||||| ||| || | | | |||
Sbjct 124598 GGTCAGGTGACGGCCG--GTTG----CCTTGTTGAGGGTGTCTGTGATGCTGACAATCGA 124651
Query 35234 CATCCGAGCCAGAGGCAGCGGCCCCGAGGCCGTGCCGCCGAACGTCTTCAGCTTCGCGCC 35293
|| |||| ||| || || || || || || ||||| ||||||| | ||||
Sbjct 124652 TGTC---GCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGCC 124708
Query 35294 GAACTGACGGACCCGAGACACGTCGTAGACGCGCTGGAAGTGGCTGACCTCATCCCGGTA 35353
| | ||| |||| |||| ||||| | ||| || |||| | ||||
Sbjct 124709 GTGTCCTCTGACATCGGACAGGTCGAAGACG---AGTCCGTGCATGCCCTCTT--CGGTC 124763
Query 35354 GTGGGTGTCGATCAGGTCCACCAGAGCAGCGGCCCAGCCCTCTCGGGAGTCCTCCACG-- 35411
| ||||| |||||||||| | || ||| ||||||||| |||| ||||||||||
Sbjct 124764 G-ACGTGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGAC 124822
Query 35412 ATGAACGCACCAGCCCAGTCGGGGTCGTACTCCGTCGACAGGACGCCGGC---CTCCTTC 35468
|||| || ||| | || || | | ||| | ||||| ||| || ||||||
Sbjct 124823 ATGAGTGCGGCAG--CTTTCCGGCGCCTTGTCCATGAACAGGCTGCCTGCCTGCTCCTTG 124880
Query 35469 ATCGCCTCGTAGTCCGGGTGGTCCGGGTCGCAGACGATGTGGACGTACAGCTCCTGCTGA 35528
| || ||||||||||||| | | || | || | ||| |||| |||| |
Sbjct 124881 GTTGCTGCGTAGTCCGGGTGAGACTCGGCGATGGTGACGCCCACGAACAG--GCTGCCCA 124938
Query 35529 ACCTCCGCGTAGTCGGCCAGGAATCGGTTC---GAGTAGTTCGCCCCGACGCCGCCGCCC 35585
|| || ||| |||| || ||| | |||||||| || ||||| |||||||||
Sbjct 124939 GGATCGGCTGAGT-GGCCTTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCGCCGCCC 124997
Query 35586 TCCATGAGCCGCATGAACG---TGAACTCGAAGTGGTCCGAGGGCTTCGGCCCCCAGCCC 35642
|| | || || | ||| ||||| ||||||||| || ||| | | ||| ||
Sbjct 124998 TCGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGACCATCCG 125054
Query 35643 GAGACCCAGCAGTTGAAGAGGTGCTGGGCGTTCTTCACG---CCTGACGCCCACAGGTGG 35699
||||| | |||||| ||| ||| |||||| || | |||||||||||
Sbjct 125055 GAGACGAAACAGTTG-CGAGAGAACGGG-----TTCACGGTTCCGGTGACCCACAGGTGG 125108
Query 35700 CGTCCACCGGGGAGGATCTTGAAGTCCTCCATCAGCCGGATCAGATCCTCGCGCTCACCG 35759
||||| | ||||| |||||||||| | ||||| || || |||||| |||||
Sbjct 125109 CGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCGTTC 125168
Query 35760 TCGAG-GTGGTAGCGCTCGTCCACCAGCGCCAGGTTCCCGTCGACCACGCGCCGCACCGT 35818
||| ||| | | || ||| ||||||| ||||||||||| || || ||
Sbjct 125169 GGGAGCCAGGTTGAGGACGGGACGTAGC-CCAGGTTGCCGTCGACCACACGTGAGACGGT 125227
Query 35819 TTCCGGCCAGGTCTCCTTAGACCCGTCGGGCTTGGTCCGGGAGTAGGTCCGGTTGTAGAC 35878
|| ||| |||||||| | ||||| |||||| | || ||||||||||| ||| ||
Sbjct 125228 CTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTATAC 125287
Query 35879 CAGCTCCCCTGTCGGTCCCCA 35899
| || || ||||||||||
Sbjct 125288 CTCCTTGCCGATCGGTCCCCA 125308
>seq47396
Length=7053
Score = 80.6 bits (88), Expect = 9e-11
Identities = 61/71 (86%), Gaps = 1/71 (1%)
Strand=Plus/Plus
Query 3954 CATAGGCACGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTC 4013
|| ||| |||||||||| ||| ||||||||||||||||||| |||| || |||||||||
Sbjct 4050 CAGAGGGGCGTAGCTCAACTGG-CAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTC 4108
Query 4014 GAGTCCTGCCG 4024
||||||| ||
Sbjct 4109 AAGTCCTGTCG 4119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162165455694024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |