Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028807.1 Length=43150 Score E Sequences producing significant alignments: (Bits) Value seq51280 105 2e-18 >seq51280 Length=5510 Score = 105 bits (116), Expect = 2e-18 Identities = 127/168 (76%), Gaps = 11/168 (7%) Strand=Plus/Minus Query 17538 GAGTACCCGGCCGTCGGAGCCCAGGTGTTCTACGGCCCGAACG-GCGGGACC-----CAC 17591 ||||||||||| ||| ||| |||||| |||||||| | || |||||||| ||| Sbjct 4322 GAGTACCCGGCGATCGCAGCGCAGGTGCTCTACGGC---AGCGCGCGGGACCTGACGCAC 4266 Query 17592 ACCGGTCTGGTCTACGACTACGACGCCACGTACGTGTACACCGTGGAGGGCAACACGAAC 17651 ||||| ||||| | || |||| ||||||||| | ||| ||||||||||||||| Sbjct 4265 ACCGGACTGGTGGTGGCCTTCGACAGCACGTACGTCTGGTGCGTCGAGGGCAACACGAAC 4206 Query 17652 GACTCC-GGTAGCGCGGAGGGCAACGGCGTGTACCTCAAGAAGCGCCG 17698 ||| || ||| |||| |||||| |||||||| || ||||||| || Sbjct 4205 GACACCGGGTCGCGC-GAGGGCTACGGCGTGCTGCTGCAGAAGCGTCG 4159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137504467112752