Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028813.1
Length=57766
Score E
Sequences producing significant alignments: (Bits) Value
seq232712 179 1e-40
seq148523 93.3 2e-14
seq189415 86.0 2e-12
>seq232712
Length=770
Score = 179 bits (198), Expect = 1e-40
Identities = 165/209 (79%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 42916 CATCAACCAGCTGCGACCGGGCGTCGTGGTGATCGAGAACGTAAGGGGGTTGCTCAGTGC 42975
||||| ||| || |||||| || |||||| ||||| || || |||||| ||||||||||
Sbjct 215 CATCACCCACCTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGC 156
Query 42976 AAGGGCCTATCGCGCAATGGAATCCGAAGAGGCAGCTGTGGGAGACGGAGCAGATGGACC 43035
| ||| ||||| || |||||||||| | | | |||||||| | | ||||
Sbjct 155 CCGAGCCCATCGCCCAGTGGAATCCGAGTCGAATGGTCTGGGAGACCACGACTCTCGACC 96
Query 43036 TGTTCTCCGGGCACTCGGTGCCGTACTCGGAGACCTTGCCGACCTCGGGTATGACGCGCA 43095
||||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||
Sbjct 95 TGTTCTCCGAGCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCA 36
Query 43096 ATGGACGACTGTTGCCGCTTCCGCAGTCG 43124
||| |||||| |||| ||||| ||||
Sbjct 35 GTGGGTCACTGTTCCCGCCTCCGCCGTCG 7
Score = 100 bits (110), Expect = 1e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 42627 TCGGTTCGCTGTTCTCCGGCGCTGGCGGCCTCGACATCGCCGTCGAGCAGTTCTTCGGCG 42686
|||| || || ||||| || |||||||||||| |||| ||| ||||||||| |
Sbjct 448 TCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGCGTGTGAGGCGTTCTTCGGTG 389
Query 42687 CCCGCACGGTGTGGCATTGCGAGCTGAACCCGGCCGCGTCCAAGGTGCTCGCGCACCGCT 42746
| || | ||||| ||| | |||| || ||||| | | ||||| |||| ||
Sbjct 388 CGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGCCCACCACT 329
Query 42747 GGCCCGGTGTGCCGAACCTCGGCGACATCACCGCGGTCGACTGGTCAGAAGTCGAGCCGG 42806
|||| |||||||||| ||||||||||||||| |||||||| | | ||||| || |
Sbjct 328 GGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGTCGAACCAG 269
Query 42807 TCGACATTCTCGCTGGCGGATTTCC 42831
| ||| | || | ||||| || ||
Sbjct 268 TGGACGTGATCACCGGCGGGTTCCC 244
>seq148523
Length=1916
Score = 93.3 bits (102), Expect = 2e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 43934 CCCGCGCCGTCGCCGACCGAGCCGAACAAGAACGGCAATCCCCGGCTGGCCGCCGCGTTC 43993
|| ||||| | |||||||| ||||||| || ||||| ||||||||| |||| ||||
Sbjct 544 CCTGCGCCCGCACCGACCGAACCGAACACCAAGGGCAACCCCCGGCTGTCCGCGCTGTTC 603
Query 43994 CCGGAATGGATGATGGGCTGGCCCGCCGGCTGGGTCACTGA 44034
||||||||||||||| | | ||||||||||||||| ||
Sbjct 604 CCGGAATGGATGATGTTCCTCCGCGCCGGCTGGGTCACCGA 644
Score = 80.6 bits (88), Expect = 1e-10
Identities = 71/89 (80%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 43257 CTGATGCCCACACCGCGCGCGACGGACGGCACGAAGGGAGGCCCGAACCAGCGCGGATCA 43316
|| ||||| || || || ||| | ||||||||||| || || ||||||||||| || ||
Sbjct 326 CTCATGCCGACGCCACGGGCGTCCGACGGCACGAAAGGCGGACCGAACCAGCGGGGGTCG 385
Query 43317 TCGGGGGACCTGATGCTGCCGAGCGCGGT 43345
|| || ||||| |||||||| ||||| ||
Sbjct 386 TCCGGAGACCTCATGCTGCCCAGCGCCGT 414
>seq189415
Length=2896
Score = 86.0 bits (94), Expect = 2e-12
Identities = 133/189 (70%), Gaps = 6/189 (3%)
Strand=Plus/Minus
Query 39798 GTGGCGTGACCAAGCGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGG 39857
||||| |||| ||| ||||| | ||| ||| |||||| |||||||||||| |||||
Sbjct 570 GTGGCAGGACCGGGCGCTGTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGG 511
Query 39858 AGGAAACGCGAAACCC---GCAAAGCGGATCTGCGGTATGTGCGACGTCCGGGACGAATG 39914
|| | ||| | | || ||||| |||||| ||||| || || || ||
Sbjct 510 CGG---CTCGACCCGCGAGGCCAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTG 454
Query 39915 CCTTCAGTGGGCGCTGGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCG 39974
||| ||| |||||| |||| |||| | |||||| |||| ||||| || ||||||||
Sbjct 453 CCTCGAGTACGCGCTGCACAAGGACGAGCGGTTCGGTATCTGGGGCGGTCTCTCCGAGCG 394
Query 39975 TGAACGCCG 39983
|| || ||
Sbjct 393 GGAGCGTCG 385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 184121772997888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |