Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028823.1 Length=58985 Score E Sequences producing significant alignments: (Bits) Value seq157980 111 6e-20 seq125305 91.5 6e-14 >seq157980 Length=2738 Score = 111 bits (122), Expect = 6e-20 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 44754 CTATGACACCGAGTTTCTCGAAGACGGCCGCACGATCGAGCTGATCTCGATTGGCATCGT 44813 ||| ||||||||||| |||||||||||| || |||| ||||||||||| |||||||| Sbjct 694 CTACGACACCGAGTTCCTCGAAGACGGCAAGACCGTCGACCTGATCTCGATCGGCATCGT 635 Query 44814 CTGTGAGGACGGCCGCGAGTACTACGCCGTCAACAGCGACATGGACCACAAGCGAATCGC 44873 | || || |||||||||||||||||| ||||| |||| ||| | || ||| Sbjct 634 CGCCGAAGATGGCCGCGAGTACTACGCCATCAACTCCGACGCTGACTGGGACCGCATCCG 575 Query 44874 CAAGGACGACTGGCTC 44889 || |||||||||||| Sbjct 574 GAAAGACGACTGGCTC 559 >seq125305 Length=4407 Score = 91.5 bits (100), Expect = 6e-14 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 44754 CTATGACACCGAGTTTCTCGAAGACGGCCGCACGATCGAGCTGATCTCGATTGGCATCGT 44813 ||| ||||||||||| |||| ||||| || || ||||| ||| ||||||| ||| |||| Sbjct 2005 CTACGACACCGAGTTCATCGAGGACGGGCGGACCATCGATCTGGTCTCGATCGGCGTCGT 2064 Query 44814 CTGTGAGGACGGCCGCGAGTACTACGCCGTCAACAGCGACATGGACCACAAGCGA 44868 | |||||||| || |||| |||||||||| || || | |||| | ||||| Sbjct 2065 CGCCGAGGACGGTCGGGAGTTCTACGCCGTCTCCACGGAGTTCGACCCCGAGCGA 2119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188009737959162