Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028832.1
Length=61511
Score E
Sequences producing significant alignments: (Bits) Value
seq84152 399 9e-107
seq134864 134 5e-27
seq171065 123 1e-23
seq231474 111 6e-20
seq12676 105 3e-18
seq74518 91.5 6e-14
>seq84152
Length=5826
Score = 399 bits (442), Expect = 9e-107
Identities = 573/799 (72%), Gaps = 19/799 (2%)
Strand=Plus/Plus
Query 54862 CGACCGGTACCCGTTCACCGCCGCGCGCATCGTCGAACTCGAC---CATCGCGCGTTCGA 54918
||| || | | |||||||||| ||||| |||| || |||||| || || || |||
Sbjct 4634 CGATCGCTTCGCGTTCACCGCGGCGCGGATCGCCGCACTCGAGGCACAGGCCGAGTCCGA 4693
Query 54919 -GCTGAACATCGACCTGACGCACTCGCCGAAATGGCGCGAACAGCTCGGAACACTCGGCG 54977
| || ||||||| ||||||| ||| ||||| || |||||||| | |||||||
Sbjct 4694 CGGTG----TCGACCTCGGGCACTCGAAGAAGTGGCGTGAGCAGCTCGGGTCGCTCGGCG 4749
Query 54978 GCGGCAACCATTTCATTGAACTGTGCCTCGACCAGCTCGACCGCGTCTGGCTGTTCCTGC 55037
|||||||||| ||||| || |||||||||||| || ||| || || ||| |||||||||
Sbjct 4750 GCGGCAACCACTTCATCGAGCTGTGCCTCGACGAGTCCGATCGGGTGTGGATGTTCCTGC 4809
Query 55038 ATTCCGGGTCTCGTGGTGTCGGCAACAAGATCGCGCAGAAACACATCAAGGCCGCCCAGA 55097
| ||||| || || |||||||||||| |||||||||| ||||||| | ||| ||||
Sbjct 4810 ACTCCGGTTCGCGGGGTGTCGGCAACCGGATCGCGCAGCGACACATCGCGATCGCGCAGA 4869
Query 55098 AC---GCCTGCGAGGG---CATCGAACTGCCGTCCAAGGATCTGGCGTACCTCACCGAAG 55151
| ||| | || | ||||| || ||| | ||| || |||||||| | |
Sbjct 4870 AGCTGGCCAGGAAGTGGCACATCGTGCTCCCGAACCCGGACCTCGCGTACCTGCCGTCCG 4929
Query 55152 GCACACCCCAATTCTACGAGTACCTACGTGAACTGCATTGGGCGCAACGATTCGCGTACT 55211
|| || | || | | |||||| || || ||| ||||| || || |||||| |
Sbjct 4930 AGACGCCGGAGCTCGAGGTGTACCTCCGGGATCTGGCGTGGGCACAGCGGTTCGCGCTCG 4989
Query 55212 CGAACCGCGCCGAAATGATGGACCGGTTCGCGCGCGCATTCGCGAACTGGATCGG-CACA 55270
||||||||| || |||||||| || ||| || || |||||| ||||| | || |||
Sbjct 4990 AGAACCGCGCTGAGATGATGGATCGCTTCCGGCAGGCGTTCGCGCACTGGGTAGGTCACG 5049
Query 55271 CCCGTCGACGACGTCTCAGCGTTCATCGCCGAAACCATCAACACCCACCACAACTACACC 55330
| || ||| || | ||| || |||| ||||||||||||||||||||||||
Sbjct 5050 ACGGT-GACC-CGGCCGAGC--TCGAGACCGAGCGGATCAACACCCACCACAACTACACC 5105
Query 55331 GAGCAGGAAGAACACGGCGGCCGGTTCGTGTGGCTCACCCGCAAAGGCGCCATCGACGCA 55390
| | || |||||||||| | ||||||||| |||||||| || || ||||||||
Sbjct 5106 GTCCGAGAGCGACACGGCGGCAAGGACGTGTGGCTGACCCGCAAGGGTGCGATCGACGCG 5165
Query 55391 CACGAAGGTGTGCGTGGCCTCATCCCCGGCAGCATGGGCACCTGCTCATACGTCGTCACC 55450
||||| |||||||| ||| ||||||| ||| ||||| || | || ||| |||| |||
Sbjct 5166 CACGAGGGTGTGCGGGGCATCATCCCGGGCTCGATGGGGACGCGGTCCTACATCGTGACC 5225
Query 55451 GGCAAAGGCAACCCCGAAGGGTTGTGCTCAGCACCGCACGGCGCTGGCCGCCGCTACTCC 55510
||||| || || || || |||| || || ||||||||||| || || || | |||
Sbjct 5226 GGCAAGGGACACGGCGGCGGTCTGTGTTCGGCGCCGCACGGCGCGGGGCGTCGGTTCTCA 5285
Query 55511 CGCACGAAAGCCCGGAAACTGTTCACCGCAGACGATTTGGCGGACCGTATGCGCGGCATC 55570
|| | | ||| | | || ||||| | |||| | | || | ||| ||| |||
Sbjct 5286 CGGGCCGAGGCCAAGCGTCGGTACACCGAGGCCGATCTCGAGGCCGCGATGACCGGGATC 5345
Query 55571 GAATACCGGCACGGCGACGCGTGGATCGACGAAATCCCCGACGCGTACAAGCCGATCGAC 55630
|| ||||||||||| | | |||||||||||| ||||| | ||||||||| ||||||
Sbjct 5346 GAGTACCGGCACGGGGCGGAGTGGATCGACGAGATCCCGCAGGCGTACAAGAGCATCGAC 5405
Query 55631 GTCGTCATGCACGACGCCG 55649
||||| ||| ||||||||
Sbjct 5406 GTCGTGATGGCCGACGCCG 5424
Score = 154 bits (170), Expect = 6e-33
Identities = 172/227 (76%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 54520 CAACCCCCAACTCGTCAACTTCGCCAGCGAAATCGACGACGACACACTGAAGCAAGCCGA 54579
||||| | | || ||||||||||| ||| |||||||| | || | | || ||| |
Sbjct 4369 CAACCTCAAGCTGCTCAACTTCGCCTCCGAGATCGACGAGAAGACGATCGACCAGGCCAA 4428
Query 54580 ACAAACCGCCAGC-ATGCCGTTCGTGTATCCGCACGTCGCACTCATGCCCGACGCACATT 54638
| |||| |||| |||| |||||| | |||||||| || | ||||| || || || |
Sbjct 4429 GGAGACCG-CAGCGCTGCCCTTCGTGCACCCGCACGTGGCGTTGATGCCGGATGCGCACT 4487
Query 54639 TCGGCAAAGGCAGCTCGGTCGGCACAGTCATCCCCACCCAAGGCGCCGTCATCCCGGCCG 54698
|||||| || | ||||||| || |||||||| || | |||||||||||||||||
Sbjct 4488 ACGGCAAGGGATCCGCGGTCGGTACCGTCATCCCGACGGTCGACGCCGTCATCCCGGCCG 4547
Query 54699 CCGTCGGCGTCGACATCGGCTGCGGCATGATCGCAGCCCGCACCACC 54745
| ||||| ||||||||||| |||||||||||||| | ||| ||||||
Sbjct 4548 CGGTCGGGGTCGACATCGGGTGCGGCATGATCGCCGTCCGGACCACC 4594
>seq134864
Length=649
Score = 134 bits (148), Expect = 5e-27
Identities = 415/636 (65%), Gaps = 31/636 (5%)
Strand=Plus/Minus
Query 55006 CGACCAGCTCGACCGCGTCTGGCTGTTCCTGCATTCCGGGTCTCGTGGTGTCGGCAACAA 55065
|||| || || |||| ||||| |||||||||| |||||||| || ||||||||||||
Sbjct 634 CGACGAGACCGGCCGCATCTGGTTGTTCCTGCACTCCGGGTCCCGCGGTGTCGGCAACCG 575
Query 55066 GATCGCGCAGAAACACATCAAGGCCGCCCAGAACGCC----TG--CGAGGGCATCGAACT 55119
|||||| ||| | |||||| || |||| ||| | || | | || ||||| ||
Sbjct 574 GATCGCCCAGCACCACATCGGGGTTGCCCGGAAGTCGATGGTGGACAACGGGATCGAGCT 515
Query 55120 GCCGTCCAAGGATCTGGCGTACCTCACCGAAGGCACACCCCAATTCTACGAGTACCTACG 55179
| | ||||| |||||||| || ||||| | ||| ||| |||||
Sbjct 514 GGCAGATCGCGATCTCGCGTACCTGGTGGAGGGCACCGAGGAGTTCGACGCCTACCTGGC 455
Query 55180 TGAACTGCATTGGGCGCAACGATTCGC-GTACTCGAACCGCGCCGAAATGATGGACCGGT 55238
|| || ||||| || | ||||| | |||| ||||||| ||| |||||||| ||
Sbjct 454 CGAGCTCACCTGGGCACAGCAGTTCGCCGCACTC-AACCGCGACGAGATGATGGAGCGTG 396
Query 55239 TCGCGCGCGCATTCGCGAACTGGATCGGCACACCCGTCGACGACGTCTCAGCGTTCATCG 55298
||| ||| || | | |||||||||| | || || | ||
Sbjct 395 TCGTGCGGTCACTGCAGTTCTGGATCGGCGCGGAGGTGGAGGT---------GT------ 351
Query 55299 CCGAAACCATCAACACCCACCACAACTACACCGAGCAGGAAGAACACGGCGGCCGGTTCG 55358
|||| | || | ||||||||||||||| | | || ||| ||| | |
Sbjct 350 CCGAGGACCTCGGCTGCCACCACAACTACACGGCCCGCGAGACGCACCACGGTGAGCTGC 291
Query 55359 TGTGGCTCACCCGCAAAGGCGCCATCGACGCACACGAAGGTGTGCGTGGCCTCATCCCCG 55418
||||| | ||||||| || |||||| |||| | | || || | || || ||||| |
Sbjct 290 TGTGGGTGTCCCGCAAGGGTGCCATCAACGCCGAGGTCGGCGTCCCCGGGCTGATCCCGG 231
Query 55419 GCAGCATGGGCACCTGCTCATACGTCGTCACCGGCAAAGGCAACCCCGAAGGGT---TGT 55475
| ||||| || || |||||||| |||||| || ||| || || |||
Sbjct 230 GGTCGATGGGTACGGCGTCGTACGTCGTGTCCGGCAGGGGGAAC---GAGCAGTCCCTGT 174
Query 55476 GCTCAGCACCGCACGGCGCTGGCCGCCGCTACTCCCGCACGAAAGCCCGGAAACTGTTCA 55535
|| ||||||||||| || ||||| |||||| || ||||| || || || ||||
Sbjct 173 GCAGTGCACCGCACGGAGCAGGCCGGGCCTACTCGCGGACGAAGGCGCGCAAGACCTTCA 114
Query 55536 CCGCAGACGATTTGGCGGACCG-TATGCGCGGCATCGAATACCGGCACGGCGACGCGTGG 55594
| | ||||| | |||| | | ||| ||| ||||| ||||| || || ||||
Sbjct 113 CGGTCGACGACCT-GCGGGCGGCGATGGTCGGGATCGAGTACCGCGACACGGAGGCGTTC 55
Query 55595 ATCGACGAAATCCCCGACGCGTACAAGCCGATCGAC 55630
||||||| ||||||| ||| |||||| ||||||
Sbjct 54 GTCGACGAGATCCCCGGCGCCTACAAGGACATCGAC 19
>seq171065
Length=1298
Score = 123 bits (136), Expect = 1e-23
Identities = 137/183 (75%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 36103 CGACGCGGTGAATCACCCGTCGCACTACACGTCCCACCCGTCCGGCGTCGAGTGCATCAC 36162
|||| ||||||| ||||| ||||||| | | || || |||||| |||||||||
Sbjct 16 CGACTCGGTGAACAACCCGCAGCACTACGTGACGCATCCCAGCGGCGTGGAGTGCATCGA 75
Query 36163 CATCACCGAACACATGGGGTTCAACCTCGGCAACGCGCTCAAATACATCTGGCGCTGCGA 36222
|||||||| |||||||| | | |||||||||| | |||| ||| |||||||| |||
Sbjct 76 GATCACCGAGCACATGGGCTACCTGCTCGGCAACGTGATCAAGTACGTCTGGCGCGCCGA 135
Query 36223 CCTGAAGAACGACGCAATCGAAGATCTGCGCAAGGCCCGGTTCTACATCGACCGCGAAAT 36282
| | ||| ||| ||| | || || || ||||||||||||||| | ||||| || ||
Sbjct 136 CATCAAGGGCGAGGCACTGGAGGACTTGAAGAAGGCCCGGTTCTACCTGGACCGGGAGAT 195
Query 36283 CGC 36285
|||
Sbjct 196 CGC 198
>seq231474
Length=516
Score = 111 bits (122), Expect = 6e-20
Identities = 328/497 (66%), Gaps = 33/497 (7%)
Strand=Plus/Plus
Query 55016 GACCGCGTCTGGCTGTTCCTGCATTCCGGGTCTCGTGGTGTCGGCAACAAGATCGCGCAG 55075
||||||||||||||||||||||| ||||| || || || ||||||||||||||||| |||
Sbjct 7 GACCGCGTCTGGCTGTTCCTGCACTCCGGCTCCCGCGGCGTCGGCAACAAGATCGCCCAG 66
Query 55076 AAACACATCAAGGCCGCCCAGAACG-CCTG---CGA-----GGGCATCGAACTGCCGTCC 55126
| |||||||||| ||| || || |||| ||| | | ||||| ||||| |
Sbjct 67 CACCACATCAAGGTCGC---GAGCGACCTGTGCCGACGCTGGTGGATCGACCTGCCCGAC 123
Query 55127 AAGGATCTGGCGTACCTCACCGA-AGGCACACCCCAATTCTACGAGTACCTACGTGAACT 55185
|| || || ||||| || || || | | |||| | ||| | || || |
Sbjct 124 CCCGACCTCGCCTACCTGGTGGAGGGGGACGACAC-GTTCTGGGCCTACATCCGCGAGAT 182
Query 55186 GCATTGGGCGCAACGATTCG-CGTACTCGAACCGCGCCGAAATGATGGACCGGTTCGCGC 55244
|| ||||| || | |||| | | ||| ||||||| || |||||| |||| || |
Sbjct 183 GCGGTGGGCCCAGCACTTCGCCCTGCTC-AACCGCGAGGAGATGATGCACCGCGTCCAGG 241
Query 55245 GCGCATTCGCGAACTGGATCGGCACACCCGTCGACGACGTCTCAGCGTTCATCGCCGAAA 55304
| ||||| || | | ||| | |||| | | || | ||| |
Sbjct 242 AGGTCGTCGCGGACGAGCTGGGCGCGACCGT-GCAGGCG--------------GACGAGA 286
Query 55305 CCATCAACACCCACCACAACTACACCGAGCAGGAAGAACACG-GCGGCCGGTTCGTGTGG 55363
| |||||| |||||||||||||||||||| | || | | ||| || ||||||
Sbjct 287 CGATCAACTGCCACCACAACTACACCGAGC-GCGAGCGCGTGTTCGGTCGCGAGGTGTGG 345
Query 55364 CTCACCCGCAAAGGCGCCATCGACGCACACGAAGGTGTGCGTGGCCTCATCCCCGGCAGC 55423
| ||||||| ||||| ||| || | | |||| || || || |||||||||
Sbjct 346 GTGTCCCGCAAGGGCGCGATCCGTGCGGGCAAGGGTGATCGCGGGCTGATCCCCGGCTCG 405
Query 55424 ATGGGCACCTGCTCATACGTCGTCACCGGCAAAGGCAACCCCGAAGGGTTGTGCTCAGCA 55483
|||||||| || ||||||||||| ||| ||| |||| | || || ||
Sbjct 406 ATGGGCACGGCGTCGTACGTCGTCACGGGCCTGGGCTACCCGCCGTCGCTGATGTCGGCC 465
Query 55484 CCGCACGGCGCTGGCCG 55500
|||||||| || |||||
Sbjct 466 CCGCACGGGGCCGGCCG 482
>seq12676
Length=358
Score = 105 bits (116), Expect = 3e-18
Identities = 134/179 (75%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 54551 ATCGACGACGACACACTGAAGCAAGCCGAACAAACCGCC-AGCATGCCGTTCGTGTATCC 54609
||||||||| ||| || ||| ||| | || |||||| ||| | | | ||||| ||
Sbjct 122 ATCGACGACCTCACGCTCGCGCAGGCCAAGCAGACCGCCGAGCTCGACAT-CGTGTCGCC 180
Query 54610 GCACGTCGCACTCATGCCCGACGCACATTTCGGCAAAGGCAGCT-CGGTCGGCACAGTCA 54668
| || | || || ||||| ||||| || | ||||| || ||| ||||||| | ||||
Sbjct 181 GTACCTGGCGCTGATGCCGGACGCGCACCTGGGCAAGGG-AGCGACGGTCGGTTCCGTCA 239
Query 54669 TCCCCACCCAAGGCGCCGTCATCCCGGCCGCCGTCGGCGTCGACATCGGCTGCGGCATG 54727
|||||||| | ||| ||||||||||||| ||||| || |||||||||||||| |||
Sbjct 240 TCCCCACCAGGGACGCGATCATCCCGGCCGCGGTCGGGGTGGACATCGGCTGCGGGATG 298
>seq74518
Length=2537
Score = 91.5 bits (100), Expect = 6e-14
Identities = 232/344 (67%), Gaps = 12/344 (3%)
Strand=Plus/Minus
Query 25075 CATCCAAAGATCGCTGTGATGCTCGACGTCGAATCGTGGGGCGGGCAGATCCGCGGCGAC 25134
||||||| | | | ||||||||||||||||||| |||||| | | |||||||
Sbjct 1122 CATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCC---GGCGGGAACCCCGGCGGCGAT 1066
Query 25135 CAGTCGTCCGGCATCAATGCTGCGTTCGAGCAGATCGCCGACTG-GCTGGGGG--ACCGG 25191
|||| | | ||||| | | | | | ||| ||| | || || || ||
Sbjct 1065 GCGTCGGACTGGATCAACCGCACCTACTGGAACCTCGTCGAATACGCCGGTGGCAACGCT 1006
Query 25192 CGGCGTGTGATCGGCTACGGCAATACCGGTGACCTCAACGCGCTATGGCCGCGCAAACCT 25251
||||| ||||||||||||| || | | ||| || || | | ||| || | ||
Sbjct 1005 CGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGG-CGTGTTCGCCC 947
Query 25252 GAAGGGGC-GCGGCTGGTGGTCGCCGGATACGG--GAAGCTGCCTACCTACCCGGGCATG 25308
| ||| | ||| || | | |||||| ||||| | | | | |||| |||| || |
Sbjct 946 GGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCA-ATCCGAACCTGGCCGGACA-G 889
Query 25309 ATCGCCCACCAATACACCGACGGGCAGGGCTACGGCGGTGGCCTGCCTGAAGGCGCGCCA 25368
||||| ||||| ||||||||||| | ||| | |||||| || || || ||||| || ||
Sbjct 888 ATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGAAGGGGCACCG 829
Query 25369 CCGTTCGGGCGGTGCGACATGAACGCGGCAAACGGGCTGACTGC 25412
|||||||| |||||||||||| | || |||| || || ||
Sbjct 828 CCGTTCGGCAACTGCGACATGAACTCCGCCGACGGCCTCACGGC 785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 196066341316158
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