Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028846.1 Length=61081 Score E Sequences producing significant alignments: (Bits) Value seq74518 113 2e-20 seq171065 93.3 2e-14 seq20617 93.3 2e-14 >seq74518 Length=2537 Score = 113 bits (124), Expect = 2e-20 Identities = 236/347 (68%), Gaps = 16/347 (5%) Strand=Plus/Minus Query 26518 GGGCGTACCGCATCCGCGCATGGCCGTGATGATCGACGTCGAGTCGTGGGGCGGGCAGAT 26577 ||||| || |||||| | ||| ||||| |||||||||| || |||||| | Sbjct 1132 GGGCGGACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCC---GGCGGGAACCC 1076 Query 26578 CACGGGCGACCAGTCCGACGGCATTAACGCCGCGCACGCACAGA----TCGCCGAGTGGC 26633 | ||||| ||| ||| | || ||| ||||| || | ||| ||| | Sbjct 1075 CGGCGGCGATGCGTCGGACTGGATCAAC----CGCACCTACTGGAACCTCGTCGAATACG 1020 Query 26634 TCGGTG---ACGCCCGCCGGGTGATCGGTTACGGCAACACGGGCGACCTCAACAACCTGT 26690 ||||| |||| || ||||||||||| |||| ||| ||| |||| || | ||| Sbjct 1019 CCGGTGGCAACGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGT 960 Query 26691 GGCCGCGCAAGCCCGATGGGC-TGCGCCTGGTGCTCGCCGCGTACGGATCTAACCCCGGC 26749 ||| | | ||||| |||| |||| || | ||||| ||||| || || | Sbjct 959 GGC-GTGTTCGCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAAC 901 Query 26750 TATCCCGGCAAGATCGCGCACCAGTACACGAACGGCGGCGGGTATGGCGGTGGATTGCCC 26809 |||| ||||||||||||||||||| ||||| | || | ||||| ||| | ||| Sbjct 900 CTGGCCGGACAGATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCC 841 Query 26810 GAGGGCGCACCACCTTTCGGCAATTGCGACATGAACAGCGCCGACGG 26856 || || ||||| || |||||||| |||||||||||| ||||||||| Sbjct 840 GAAGGGGCACCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGG 794 >seq171065 Length=1298 Score = 93.3 bits (102), Expect = 2e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 39424 GAGTGCATCGACATTGTCGAGCACATGGGCTACAGCCTCGGCAACGTCACCAAGTACGTG 39483 ||||||||||| || |||||||||||||||| ||||||||||| | ||||||||| Sbjct 65 GAGTGCATCGAGATCACCGAGCACATGGGCTACCTGCTCGGCAACGTGATCAAGTACGTC 124 Query 39484 TGGCGCTGTGACCTCAAGTGGGACGCGATCGAGGATCTGCGAAAGGCCCGGCAGTACCTC 39543 |||||| ||| ||||| | || || | ||||| || ||||||||| ||||| Sbjct 125 TGGCGCGCCGACATCAAGGGCGAGGCACTGGAGGACTTGAAGAAGGCCCGGTTCTACCTG 184 Query 39544 GATTTTGAGATCGC 39557 || |||||||| Sbjct 185 GACCGGGAGATCGC 198 >seq20617 Length=36039 Score = 93.3 bits (102), Expect = 2e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 39421 ATCGAGTGCATCGACATTGTCGAGCACATGGGCTACAGCCTCGGCAACGTCACCAAGTAC 39480 |||||||||||||| || | |||||||| || | || | ||||||| | |||||| Sbjct 28194 ATCGAGTGCATCGAGATCACCAAGCACATGAACTTCTGCTTGGGCAACGCGATGAAGTAC 28135 Query 39481 GTGTGGCGCTGTGACCTCAAGTGGGACGCGATCGAGGATCTGCGAAAGGCCCGGCAGTAC 39540 | |||||| || |||||| | ||| | ||||||||||| |||||| ||||||| Sbjct 28134 ATCTGGCGCGCTGGGCTCAAGGGCGACAGTGTGGAGGATCTGCGCAAGGCCAAGCAGTAC 28075 Query 39541 CTCGATTTTGAGATCG 39556 |||| || ||||||| Sbjct 28074 ATCGACTTCGAGATCG 28059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194694868852378