Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028889.1 Length=59416 Score E Sequences producing significant alignments: (Bits) Value seq232712 194 6e-45 >seq232712 Length=770 Score = 194 bits (214), Expect = 6e-45 Identities = 338/504 (67%), Gaps = 56/504 (11%) Strand=Plus/Minus Query 44997 ATCGGTTCGCTGTTCTCCGGCGCTGGCGGCCTCGACATCGCCGTCGAGCAGTTCTTCGGC 45056 ||||| || || ||||| || |||||||||||| |||| ||| ||||||||| Sbjct 449 ATCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGCGTGTGAGGCGTTCTTCGGT 390 Query 45057 GCCCGCACGGTGTGGCATTGCGAGCTGAACCCGGCCGCGTCGAAGGTGCTCGCGCACCGC 45116 || || | ||||| ||| | |||| || |||||| | | ||||| |||| | Sbjct 389 GCGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGCCCACCAC 330 Query 45117 TGGCCCGGTGTGCCGAACCTCGGCGATATCACCGCGGTCGACTGGGCCGAGGTCGAACCG 45176 ||||| |||||||||| |||||| |||||||| |||||||| | | ||||||||| Sbjct 329 TGGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGTCGAACCA 270 Query 45177 GTCGACATTCTCGCTGGCGGATTTCCCTGCCAGGACGTGAGTGCCGCCGGTCGCCGCGCC 45236 || |||||||| | || Sbjct 269 GT------------------------------GGACGTGAT---------------CACC 255 Query 45237 GGCATCGCCGAGGGCACCCGCTCGGGCCTGTGGGCGCTCTTCGCCGAAGTCATCAACCAG 45296 ||| ||| ||||| || |||||||||| | | | | ||||| ||| Sbjct 254 GGC--------GGGTTCCCGC---GGTCTGTGGGCGCACATGCACACCGCCATCACCCAC 206 Query 45297 CTGCGGCCGCGGGCCGTGGTGATCGAGAACGTAAGGGGATTGCTCAGTGCAAGGGCCTAT 45356 || || ||||| |||||| ||||| || || ||||| |||||||||| | ||| || Sbjct 205 CTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGCCCGAGCCCAT 146 Query 45357 CGCGCAATGGAATCCGAAGAGACAACTGTGGGAGACGGGGCAGATGGACCTATTCTCCGA 45416 ||| || |||||||||| || | |||||||| | | ||||| |||||||| Sbjct 145 CGCCCAGTGGAATCCGAGTCGAATGGTCTGGGAGACCACGACTCTCGACCTGTTCTCCGA 86 Query 45417 GCACTCGGTGCCGTACTCGGAGACCTTGCCGACCTCGGGTATGACGCGCAGTGGACGACT 45476 |||||||| |||||||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct 85 GCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCAGTGGGTCACT 26 Query 45477 GTTGCCGCTTCCGCAGTCGGCGCC 45500 ||| |||| ||||| |||| |||| Sbjct 25 GTTCCCGCCTCCGCCGTCGACGCC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189384399893788