Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028936.1
Length=59052
Score E
Sequences producing significant alignments: (Bits) Value
seq84152 468 2e-127
seq134864 163 1e-35
seq74518 154 6e-33
seq231474 131 6e-26
seq20617 120 1e-22
>seq84152
Length=5826
Score = 468 bits (518), Expect = 2e-127
Identities = 595/802 (74%), Gaps = 35/802 (4%)
Strand=Plus/Plus
Query 53046 CGGTGTCGACCTGTCGCACTCGCCGAAGTGGCGTGAGCAGCTCGGCACGCTCGGCGGTGG 53105
|||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||
Sbjct 4694 CGGTGTCGACCTCGGGCACTCGAAGAAGTGGCGTGAGCAGCTCGGGTCGCTCGGCGGCGG 4753
Query 53106 CAATCACTTCATCGAGTTGTGTGTCGACCACCTTGACCGTGTGTGGTTGTTCCTGCACTC 53165
||| |||||||||||| |||| ||||| | || || |||||| |||||||||||||
Sbjct 4754 CAACCACTTCATCGAGCTGTGCCTCGACGAGTCCGATCGGGTGTGGATGTTCCTGCACTC 4813
Query 53166 CGGTTCGCGTGGTGTAGGCAACAAGATCGCGCAGCGGCATATCGCTGCGGCGCAGG-GCT 53224
||||||||| ||||| |||||| |||||||||||| || ||||| |||||| |||
Sbjct 4814 CGGTTCGCGGGGTGTCGGCAACCGGATCGCGCAGCGACACATCGCGATCGCGCAGAAGCT 4873
Query 53225 ACTGCCACAACAACGGCC--TGCAGGTGCCTCACCCTGATCTGGCGTATCT--CGTC-GA 53279
|||| | | ||| | | | || |||| || || ||||| || |||| ||
Sbjct 4874 G--GCCAGGA-AGTGGCACATCGTGCTCCCGAACCCGGACCTCGCGTACCTGCCGTCCGA 4930
Query 53280 GGGCACGCCCGAGTTCGACTCGTACATCGTCGAGTTGCGGTGGGCGCAGCGGTTCGCGTA 53339
| ||||| ||| |||| |||| || || || |||||| ||||||||||||
Sbjct 4931 G---ACGCCGGAGCTCGAGGTGTACCTCCGGGATCTGGCGTGGGCACAGCGGTTCGCGCT 4987
Query 53340 CCTGAACCGTGCCGAGATGCTGGATCGTTTCGCGCGGGCGTTCGCGCACTGGATGGGTTA 53399
| |||||| || |||||| ||||||| ||| || |||||||||||||||| | ||| |
Sbjct 4988 CGAGAACCGCGCTGAGATGATGGATCGCTTCCGGCAGGCGTTCGCGCACTGGGTAGGTCA 5047
Query 53400 CCCGCCGGGTGAC---GCCGATTCGCTGCTGGTGGAGACGATCAACACTCATCACAACTA 53456
| | ||| |||| ||||| ||| | ||| ||||||||| || ||||||||
Sbjct 5048 C--GACGG-TGACCCGGCCGA---GCTCGAGACCGAGCGGATCAACACCCACCACAACTA 5101
Query 53457 CACG--CAGAAGGAAACTCACGGCGGCCGTGAGGTGTGGTTGACCCGCAAGGGTGCGATC 53514
||| | || | || |||||||| || |||||| ||||||||||||||||||||
Sbjct 5102 CACCGTCCGAGAGCGAC--ACGGCGGCAAGGACGTGTGGCTGACCCGCAAGGGTGCGATC 5159
Query 53515 GACGCGAACAAGGGGGTGCGGGGGCTGATTCCCGGCAGCATGGGCACCCGCTCGTATGTC 53574
|||||| || |||| |||||||| | || || ||| ||||| || || || || ||
Sbjct 5160 GACGCGCACGAGGGTGTGCGGGGCATCATCCCGGGCTCGATGGGGACGCGGTCCTACATC 5219
Query 53575 GTCACCGGCAAGGGCAATCCCGAGGCG--TTGTGCTCGGCGCCGCACGGTGCGGGCCGCC 53632
|| ||||||||||| | | | |||| |||| |||||||||||||| ||||| || |
Sbjct 5220 GTGACCGGCAAGGG--ACACGGCGGCGGTCTGTGTTCGGCGCCGCACGGCGCGGGGCGTC 5277
Query 53633 GGTTCTCCCGCAACAAGGCCCGCAAG---ATGTTCACCGTCGAGGATCTGGACGCCCGCA 53689
||||||| || | |||| |||| || ||||| | ||||| || ||| |
Sbjct 5278 GGTTCTCACGGGCCGAGGC---CAAGCGTCGGTACACCGAGGCCGATCTCGAGGCCGCGA 5334
Query 53690 TGGCTGGCATTGAGTATCGGCGCGGCGAGGCGTGGGTCGACGAGATTCCCGACGCCTACA 53749
|| | || || ||||| |||| ||| | || |||| |||||||||| || | || ||||
Sbjct 5335 TGACCGGGATCGAGTACCGGCACGGGGCGGAGTGGATCGACGAGATCCCGCAGGCGTACA 5394
Query 53750 AGCCGATTGACGTCGTGATGGCCGACGCGGAGAGCCTCGTATCGGTTGACGTCGAGCTGC 53809
|| || |||||||||||||||||||| ||| ||||||| ||| | ||| | ||||
Sbjct 5395 AGAGCATCGACGTCGTGATGGCCGACGCCGAGCGCCTCGTGTCGATCGACCACACCCTGC 5454
Query 53810 GCCAGGTGCTCAACGTGAAGGG 53831
| ||||||||||||||||||||
Sbjct 5455 GTCAGGTGCTCAACGTGAAGGG 5476
Score = 114 bits (126), Expect = 5e-21
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 52673 TGATCAACTTCGCCAGCGAGGTTGACGACGAGACTCTCGCCCAGGCGCAGCAGACGGCTG 52732
|| ||||||||||| |||| | ||||| |||| ||| |||||| || |||| || |
Sbjct 4380 TGCTCAACTTCGCCTCCGAGATCGACGAGAAGACGATCGACCAGGCCAAGGAGACCGCAG 4439
Query 52733 ACATGCCGTTCGTGTACCCGCACGTGGCGCTCATGCCTGACGCGCATTTCGGGAAGGGCA 52792
|||| |||||| |||||||||||||| | ||||| || ||||| | ||| ||||| |
Sbjct 4440 CGCTGCCCTTCGTGCACCCGCACGTGGCGTTGATGCCGGATGCGCACTACGGCAAGGG-A 4498
Query 52793 GCAGC-GTCGGCACGGTGATCCCGACCGAGGGTGNNNNNNNNNNNNNNNCGGTGGGTGTG 52851
| || ||||| || || |||||||| | | | |||| || ||
Sbjct 4499 TCCGCGGTCGGTACCGTCATCCCGACGGTCGACGCCGTCATCCCGGCCGCGGTCGGGGTC 4558
Query 52852 GACATTGGTTGCGGCATGATCGCCGCCCGCAC 52883
||||| || |||||||||||||||| ||| ||
Sbjct 4559 GACATCGGGTGCGGCATGATCGCCGTCCGGAC 4590
>seq134864
Length=649
Score = 163 bits (180), Expect = 1e-35
Identities = 423/639 (66%), Gaps = 33/639 (5%)
Strand=Plus/Minus
Query 53149 TGGTTGTTCCTGCACTCCGGTTCGCGTGGTGTAGGCAACAAGATCGCGCAGCGGCATATC 53208
|||||||||||||||||||| || || ||||| |||||| |||||| |||| || |||
Sbjct 615 TGGTTGTTCCTGCACTCCGGGTCCCGCGGTGTCGGCAACCGGATCGCCCAGCACCACATC 556
Query 53209 GCTGCGGCGCAG--GGCTACTGCCACAACAACGGCCTGCAGGTGCCTCACCCTGATCTGG 53266
| | || | | | | | | ||||||| | || || | | | ||||| |
Sbjct 555 GGGGTTGCCCGGAAGTCGATGGTGG--ACAACGGGATCGAGCTGGCAGATCGCGATCTCG 498
Query 53267 CGTATCTCGTCGAGGGCACGCCCGAGTTCGACTCGTACATCGTCGAGTTGCGGTGGGCGC 53326
|||| || || |||||||| ||||||||| | ||| | | |||| | ||||| |
Sbjct 497 CGTACCTGGTGGAGGGCACCGAGGAGTTCGACGCCTACCTGGCCGAGCTCACCTGGGCAC 438
Query 53327 AGCGGTTCGCGTACCTGAACCGTGCCGAGATGCTGGATCGTTTCGCGCGGGCGTTCGCGC 53386
||| |||||| || ||||| | ||||||| |||| ||| ||| |||| | | |
Sbjct 437 AGCAGTTCGCCGCACTCAACCGCGACGAGATGATGGAGCGTGTCGTGCGGTCACTGCAGT 378
Query 53387 ACTGGATGGGTTACCCGCCG-GGTGACGCCGATTCGCTGCTGGTGGAGACGATCAACACT 53445
|||||| || ||| | |||| || | || ||| || |
Sbjct 377 TCTGGATCGG-----CGCGGAGGTG-----GA------GGTGTCCGAGGACCTCGGCTGC 334
Query 53446 CATCACAACTACACGCAGAAGGAAACTCACGGCGGCCGTGAGGTG---TGGTTGACCCGC 53502
|| |||||||||||| || || ||| ||| |||| || ||| || |||||
Sbjct 333 CACCACAACTACACGGCCCGCGAGACGCACCACGG---TGAGCTGCTGTGGGTGTCCCGC 277
Query 53503 AAGGGTGCGATCGACGCGAACAAGGGGGTGCGGGGGCTGATTCCCGGCAGCATGGGCACC 53562
|||||||| ||| |||| | || || | |||||||| || || ||||| ||
Sbjct 276 AAGGGTGCCATCAACGCCGAGGTCGGCGTCCCCGGGCTGATCCCGGGGTCGATGGGTACG 217
Query 53563 CGCTCGTATGTCGTCACCGGCAAGGGCAATCCCGAGGCGT---TGTGCTCGGCGCCGCAC 53619
||||| ||||| |||||| ||| || |||| || ||||| || ||||||
Sbjct 216 GCGTCGTACGTCGTGTCCGGCAGGGGGAA---CGAGCAGTCCCTGTGCAGTGCACCGCAC 160
Query 53620 GGTGCGGGCCGCCGGTTCTCCCGCAACAAGGCCCGCAAGATGTTCACCGTCGAGGATCTG 53679
|| || ||||| | ||| || | ||||| ||||||| ||||| ||||| || |||
Sbjct 159 GGAGCAGGCCGGGCCTACTCGCGGACGAAGGCGCGCAAGACCTTCACGGTCGACGACCTG 100
Query 53680 GACGCCCGCATGGCTGGCATTGAGTATCGGCGCGGCGAGGCGTGGGTCGACGAGATTCCC 53739
|| |||| || || ||||| || | ||||||| ||||||||||| |||
Sbjct 99 CGGGCGGCGATGGTCGGGATCGAGTACCGCGACACGGAGGCGTTCGTCGACGAGATCCCC 40
Query 53740 GACGCCTACAAGCCGATTGACGTCGTGATGGCCGACGCG 53778
| |||||||||| || ||| ||||||||||| |||
Sbjct 39 GGCGCCTACAAGGACATCGACCAGGTGATGGCCGATGCG 1
>seq74518
Length=2537
Score = 154 bits (170), Expect = 6e-33
Identities = 375/547 (69%), Gaps = 27/547 (5%)
Strand=Plus/Minus
Query 24938 CTGTGCATCCGATCGAACGACGGCACGTACCGAGACAAGAACTGGGCCACCAACTACGCC 24997
|||| ||||| |||||||||||||| | ||| ||| | ||| || ||||||||
Sbjct 1305 CTGTCGATCCGTTCGAACGACGGCACATTCCGCGACCCGCACTTCGCACAGAACTACGCG 1246
Query 24998 TGGTGCAAGCGCGCAG--TCGACGACGGCCGGCTCAAGTTCTTCATCGTCTACTTCGTGT 25055
||| | || ||||| ||||| ||| || ||| || |||||||||| |
Sbjct 1245 TGGATCC-GC-CGCAGCCTCGACCGCGGGCGCCTCCGTGTCGGGATCGTCTACTGCTACC 1188
Query 25056 GGCGTCCGAACTGGC---AGGCCGCGGTTGACACGCT---CATG-TCGCAAGTG-GGGCA 25107
||| |||||||||| || ||||| || || |||| ||| ||| ||||
Sbjct 1187 TGCGCCCGAACTGGCTCGAGACCGCGAACACCATGCGGGACATGATCGATCGTGCGGGCG 1128
Query 25108 -ACCACATCCGCGCATGGCCGTGATGATCGACGTCGAGAGCTGGGGCGGTCAGATCGGCG 25166
|| ||||| | ||| ||||| |||||||||| | ||||| | |||||
Sbjct 1127 GACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCC---GGCGGGAACCCCGGCG 1071
Query 25167 GCGACCAGTCGAACGGAATCAACGCCGCGTACGAGCGGATCGCCGGATGGCTCGGCG--A 25224
|||| |||| || | |||||| | | ||| | ||| || || ||| | |
Sbjct 1070 GCGATGCGTCGGACTGGATCAACCGCACCTACTGGAACCTCGTCGAATACGCCGGTGGCA 1011
Query 25225 TCGC-CGCCGCGTGATCGGCTACGGCAACGTCGGCGACCTCGACCGGCTCTGGCCGCGCA 25283
||| || || ||||||||||||| |||| | |||| ||| | || | |||| | |
Sbjct 1010 ACGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGGC-GTGTT 952
Query 25284 AGCCCGA-GGGTGTGCGCCTGGTCGTCGCCGGATACGGGCGGCTGCC-AACGTATCCCGG 25341
||||| ||| |||| || ||| |||||| ||||| || || ||| | || ||
Sbjct 951 CGCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAACCTGGCC-GG 893
Query 25342 CCTGATCGCCCACCAGTACACCGATGGGCAGGGCTACGGCGGCGGGCTGCCCGAGGGCGC 25401
| |||||| |||||||||||||| || | ||| | ||||||||| || ||||| || ||
Sbjct 892 ACAGATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGAAGGGGC 833
Query 25402 CCCACCTTTCGGCAACTGCGACATGAACGCAGCCAACGGGCTGACCG-CGA-CAGCGTTC 25459
|| || ||||||||||||||||||||| | ||| |||| || || | ||| || ||||
Sbjct 832 ACCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGGCCTCACGGCCGATCA--GTTC 775
Query 25460 GCGGCGG 25466
||| |||
Sbjct 774 GCGACGG 768
>seq231474
Length=516
Score = 131 bits (144), Expect = 6e-26
Identities = 329/493 (67%), Gaps = 19/493 (4%)
Strand=Plus/Plus
Query 53140 GACCGTGTGTGGTTGTTCCTGCACTCCGGTTCGCGTGGTGTAGGCAACAAGATCGCGCAG 53199
||||| || ||| |||||||||||||||| || || || || |||||||||||||| |||
Sbjct 7 GACCGCGTCTGGCTGTTCCTGCACTCCGGCTCCCGCGGCGTCGGCAACAAGATCGCCCAG 66
Query 53200 CGGCATATCGCTGCGGCGCAGGGCTACTGCCACAACAACGGCCTGCAGGTGCCTCACCCT 53259
| || ||| | ||| | | |||| | | | | |||| ||||
Sbjct 67 CACCACATCAAGGTCGCGAGCGACCTGTGCCGACGCTGGTGGATCGACCTGCCCGACCCC 126
Query 53260 GATCTGGCGTATCTCGTCGAGGGC-ACGCCCGAGTTCGACTCGTACATCGTCGAGTTGCG 53318
|| || || || || || ||||| ||| | |||| | |||||| |||| ||||
Sbjct 127 GACCTCGCCTACCTGGTGGAGGGGGACGACAC-GTTCTGGGCCTACATCCGCGAGATGCG 185
Query 53319 GTGGGCGCAGCGGTTCGCGTACCTGAACCGTGCCGAGATGCTGGATCGTTTCGCGCGGGC 53378
|||||| |||| ||||| || ||||| | |||||| || | || || | ||
Sbjct 186 GTGGGCCCAGCACTTCGCCCTGCTCAACCGCGAGGAGATGATGCACCGCGTCCAGGAGGT 245
Query 53379 GTTCGCGCACTGGATGGGTTACCCGCCGGGTGACGCCGATTCGCTGCTGGTGGAGACGAT 53438
||||| || | |||| ||| ||| || || | || ||||||||
Sbjct 246 CGTCGCGGACGAGCTGGG-----CGC-----GAC--CGT---GCAGGCGGACGAGACGAT 290
Query 53439 CAACACTCATCACAACTACACGCAGAAGGAAACTCACG-GCGGCCGTGAGGTGTGGTTGA 53497
|||| || ||||||||||| || | | | | | ||| || ||||||||| ||
Sbjct 291 CAACTGCCACCACAACTACACCGAG-CGCGAGCGCGTGTTCGGTCGCGAGGTGTGGGTGT 349
Query 53498 CCCGCAAGGGTGCGATCGACGCGAACAAGGGGGTGCGGGGGCTGATTCCCGGCAGCATGG 53557
|||||||||| |||||| ||| |||||| | || |||||||| |||||| ||||
Sbjct 350 CCCGCAAGGGCGCGATCCGTGCGGGCAAGGGTGATCGCGGGCTGATCCCCGGCTCGATGG 409
Query 53558 GCACCCGCTCGTATGTCGTCACCGGCAAGGGCAATCCCGAGGCGTTGTGCTCGGCGCCGC 53617
|||| ||||| |||||||| ||| |||| | || | || || ||||| ||||
Sbjct 410 GCACGGCGTCGTACGTCGTCACGGGCCTGGGCTACCCGCCGTCGCTGATGTCGGCCCCGC 469
Query 53618 ACGGTGCGGGCCG 53630
|||| || |||||
Sbjct 470 ACGGGGCCGGCCG 482
>seq20617
Length=36039
Score = 120 bits (132), Expect = 1e-22
Identities = 111/141 (79%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 40176 GATCGAGTGCATCGACATTACGCAGCACATGGGGTTCTGCCTCGGCAACGCCACCAAGTA 40235
||||||||||||||| || || |||||||| |||||| | |||||||| | |||||
Sbjct 28195 GATCGAGTGCATCGAGATCACCAAGCACATGAACTTCTGCTTGGGCAACGCGATGAAGTA 28136
Query 40236 CATCTGGCGCTGCGACCTCAAGAACGACGCAATCGAGGATCTGCGCAAGGCAATCCAGTA 40295
|||||||||| | |||||| |||| | ||||||||||||||||| | |||||
Sbjct 28135 CATCTGGCGCGCTGGGCTCAAGGGCGACAGTGTGGAGGATCTGCGCAAGGCCAAGCAGTA 28076
Query 40296 CATCGAGTTCGAGATTGAGCG 40316
|||||| |||||||| || ||
Sbjct 28075 CATCGACTTCGAGATCGACCG 28055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 188223432505844
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