Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028937.1 Length=58338 Score E Sequences producing significant alignments: (Bits) Value seq232712 170 7e-38 seq148523 87.8 7e-13 seq189415 86.0 2e-12 >seq232712 Length=770 Score = 170 bits (188), Expect = 7e-38 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44001 CATCAACCAGCTGCGGCCGGGCGTCGTGGTGATCGAGAACGTAAGGGGGTTGCTCAGTGC 44060 ||||| ||| || || ||| || |||||| ||||| || || |||||| |||||||||| Sbjct 215 CATCACCCACCTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGC 156 Query 44061 AAGGGCCTATCGCGCAATGGAATCCGAAGAGGCAGCTGTGGGAGACGGGGCAGATGGACC 44120 | ||| ||||| || |||||||||| | | | |||||||| | | |||| Sbjct 155 CCGAGCCCATCGCCCAGTGGAATCCGAGTCGAATGGTCTGGGAGACCACGACTCTCGACC 96 Query 44121 TATTCTCCGGGCACTCGGTGCCGTACTCGGAGACCTTGCCGACCTCGGGTATGACGCGCA 44180 | ||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||| Sbjct 95 TGTTCTCCGAGCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCA 36 Query 44181 ATGGACGACTGTTGCCGCTTCCGCAGTCG 44209 ||| |||||| |||| ||||| |||| Sbjct 35 GTGGGTCACTGTTCCCGCCTCCGCCGTCG 7 Score = 87.8 bits (96), Expect = 7e-13 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 43712 TCGGTTCGCTGTTCTCCGGCGCTGGCGGCCTCGACATCGCCGTCGAGCAGTTCTTCGGCG 43771 |||| || || ||||| || |||||||||||| |||| ||| ||||||||| | Sbjct 448 TCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGCGTGTGAGGCGTTCTTCGGTG 389 Query 43772 CCCGCACGGTGTGGCATTGCGAGCTGAACCCGGCCGCGTCCAAGGTGCTCGCGCACCGCT 43831 | || | ||||| ||| | |||| || ||||| | | ||||| |||| || Sbjct 388 CGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGCCCACCACT 329 Query 43832 GGCCCGGTGTGCCGAACCTCGGCGATATCACCGCGGTCGACTGGTCAGAAGTCGAGCCGG 43891 |||| |||||||||| |||||| |||||||| |||||||| | | ||||| || | Sbjct 328 GGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGTCGAACCAG 269 Query 43892 T 43892 | Sbjct 268 T 268 >seq148523 Length=1916 Score = 87.8 bits (96), Expect = 7e-13 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 45098 CCAGCGCCGTCGCCGACCGAGCCGAACAAGAACGGCAATCCCCGACTCGCCGCAGCGTTC 45157 || ||||| | |||||||| ||||||| || ||||| ||||| || |||| |||| Sbjct 544 CCTGCGCCCGCACCGACCGAACCGAACACCAAGGGCAACCCCCGGCTGTCCGCGCTGTTC 603 Query 45158 CCGGAATGGATGATGGGCTGGCCCGCCGGCTGGGTCACCGA 45198 ||||||||||||||| | | |||||||||||||||||| Sbjct 604 CCGGAATGGATGATGTTCCTCCGCGCCGGCTGGGTCACCGA 644 >seq189415 Length=2896 Score = 86.0 bits (94), Expect = 2e-12 Identities = 133/189 (70%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 40709 GTGGCGTGACCAAGCGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGG 40768 ||||| |||| ||| ||||| | ||| ||| |||||| |||||||||||| ||||| Sbjct 570 GTGGCAGGACCGGGCGCTGTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGG 511 Query 40769 AGGAAACGCGAAACCC---GCAAAGCGGATCTGCGGTATGTGCGACGTCCGGGACGAATG 40825 || | ||| | | || ||||| |||||| ||||| || || || || Sbjct 510 CGG---CTCGACCCGCGAGGCCAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTG 454 Query 40826 CCTTCAGTGGGCGCTGGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCG 40885 ||| ||| |||||| |||| |||| | |||||| |||| ||||| || |||||||| Sbjct 453 CCTCGAGTACGCGCTGCACAAGGACGAGCGGTTCGGTATCTGGGGCGGTCTCTCCGAGCG 394 Query 40886 TGAACGCCG 40894 || || || Sbjct 393 GGAGCGTCG 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185946150321800