Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028937.1
Length=58338
Score E
Sequences producing significant alignments: (Bits) Value
seq232712 170 7e-38
seq148523 87.8 7e-13
seq189415 86.0 2e-12
>seq232712
Length=770
Score = 170 bits (188), Expect = 7e-38
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44001 CATCAACCAGCTGCGGCCGGGCGTCGTGGTGATCGAGAACGTAAGGGGGTTGCTCAGTGC 44060
||||| ||| || || ||| || |||||| ||||| || || |||||| ||||||||||
Sbjct 215 CATCACCCACCTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGC 156
Query 44061 AAGGGCCTATCGCGCAATGGAATCCGAAGAGGCAGCTGTGGGAGACGGGGCAGATGGACC 44120
| ||| ||||| || |||||||||| | | | |||||||| | | ||||
Sbjct 155 CCGAGCCCATCGCCCAGTGGAATCCGAGTCGAATGGTCTGGGAGACCACGACTCTCGACC 96
Query 44121 TATTCTCCGGGCACTCGGTGCCGTACTCGGAGACCTTGCCGACCTCGGGTATGACGCGCA 44180
| ||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||
Sbjct 95 TGTTCTCCGAGCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCA 36
Query 44181 ATGGACGACTGTTGCCGCTTCCGCAGTCG 44209
||| |||||| |||| ||||| ||||
Sbjct 35 GTGGGTCACTGTTCCCGCCTCCGCCGTCG 7
Score = 87.8 bits (96), Expect = 7e-13
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 43712 TCGGTTCGCTGTTCTCCGGCGCTGGCGGCCTCGACATCGCCGTCGAGCAGTTCTTCGGCG 43771
|||| || || ||||| || |||||||||||| |||| ||| ||||||||| |
Sbjct 448 TCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGCGTGTGAGGCGTTCTTCGGTG 389
Query 43772 CCCGCACGGTGTGGCATTGCGAGCTGAACCCGGCCGCGTCCAAGGTGCTCGCGCACCGCT 43831
| || | ||||| ||| | |||| || ||||| | | ||||| |||| ||
Sbjct 388 CGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGCCCACCACT 329
Query 43832 GGCCCGGTGTGCCGAACCTCGGCGATATCACCGCGGTCGACTGGTCAGAAGTCGAGCCGG 43891
|||| |||||||||| |||||| |||||||| |||||||| | | ||||| || |
Sbjct 328 GGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGTCGAACCAG 269
Query 43892 T 43892
|
Sbjct 268 T 268
>seq148523
Length=1916
Score = 87.8 bits (96), Expect = 7e-13
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 45098 CCAGCGCCGTCGCCGACCGAGCCGAACAAGAACGGCAATCCCCGACTCGCCGCAGCGTTC 45157
|| ||||| | |||||||| ||||||| || ||||| ||||| || |||| ||||
Sbjct 544 CCTGCGCCCGCACCGACCGAACCGAACACCAAGGGCAACCCCCGGCTGTCCGCGCTGTTC 603
Query 45158 CCGGAATGGATGATGGGCTGGCCCGCCGGCTGGGTCACCGA 45198
||||||||||||||| | | ||||||||||||||||||
Sbjct 604 CCGGAATGGATGATGTTCCTCCGCGCCGGCTGGGTCACCGA 644
>seq189415
Length=2896
Score = 86.0 bits (94), Expect = 2e-12
Identities = 133/189 (70%), Gaps = 6/189 (3%)
Strand=Plus/Minus
Query 40709 GTGGCGTGACCAAGCGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGG 40768
||||| |||| ||| ||||| | ||| ||| |||||| |||||||||||| |||||
Sbjct 570 GTGGCAGGACCGGGCGCTGTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGG 511
Query 40769 AGGAAACGCGAAACCC---GCAAAGCGGATCTGCGGTATGTGCGACGTCCGGGACGAATG 40825
|| | ||| | | || ||||| |||||| ||||| || || || ||
Sbjct 510 CGG---CTCGACCCGCGAGGCCAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTG 454
Query 40826 CCTTCAGTGGGCGCTGGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCG 40885
||| ||| |||||| |||| |||| | |||||| |||| ||||| || ||||||||
Sbjct 453 CCTCGAGTACGCGCTGCACAAGGACGAGCGGTTCGGTATCTGGGGCGGTCTCTCCGAGCG 394
Query 40886 TGAACGCCG 40894
|| || ||
Sbjct 393 GGAGCGTCG 385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 185946150321800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |