Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq61277 107 3e-18 >seq61277 Length=456 Score = 107 bits (118), Expect = 3e-18 Identities = 187/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 181369 CCTGATCGAAGTGATTGTTGTAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGA 181428 |||| |||| ||| ||| ||| | ||| | ||| || ||| || ||| | || || Sbjct 439 CCTGCTCGAGGTGGTTGGAGTACAGGTGCGCATCGCCCAGGGTGTGGATGAAGTCGCCCG 380 Query 181429 CTTCAAGACCACATTCCAGCGCGATCAGATGTGTCAGGAGCGCGTAAGAGGCGATGTTGA 181488 || ||||| || | |||| ||| || ||| || ||||| || |||||||||| Sbjct 379 GTTGCAGACCGACCACCTGGGCGACCAGGTGCACCAGCAGGGCGTAGGACGCGATGTTGA 320 Query 181489 AGGGAAGCCCCAAGAAGACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTTGTCAT 181548 | || | ||| | |||||||||| | || || || | | |||| || || ||| | | Sbjct 319 ACGGCACCCCGAGGAAGACGTCCGCCGAGCGTTGGTACAGCTGGCACGAGAGCTTGCCGT 260 Query 181549 TGCGAACATAGAACTGGAATCCGTAGTGGCACGGCGGCAAAGCCATTAGATCGACCGCGC 181608 | || ||||||||||| ||||||||||||| | ||||| | |||| ||| Sbjct 259 CGGCGACGTAGAACTGGAACAGCGAGTGGCACGGCGGTAGCGCCATGTCCTTGACCTCGC 200 Query 181609 CGACATTCCAAGCCGAGACCATATGACGACGG 181640 ||| ||||| ||||| || || || |||||| Sbjct 199 TGACGTTCCACGCCGACACGATGTGCCGACGG 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 659062977005640