Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028947.1
Length=62738
Score E
Sequences producing significant alignments: (Bits) Value
seq171065 131 7e-26
seq74518 113 2e-20
seq20617 95.1 5e-15
seq47396 86.0 3e-12
>seq171065
Length=1298
Score = 131 bits (144), Expect = 7e-26
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 36368 ACGACGTCGTGAACCACCCGGCGCACTACACGTCGCATCCCAGCGGAGTCGAGTGCATCA 36427
||||| |||||| ||||| ||||||| | ||||||||||||| || |||||||||
Sbjct 15 ACGACTCGGTGAACAACCCGCAGCACTACGTGACGCATCCCAGCGGCGTGGAGTGCATCG 74
Query 36428 CCGTCACTGAGCACATGGGCTTCAACCTCGGCAACGCCGTTAAGTACATCTGGCGCTGCG 36487
|||| ||||||||||||| | |||||||||| | |||||| |||||||| ||
Sbjct 75 AGATCACCGAGCACATGGGCTACCTGCTCGGCAACGTGATCAAGTACGTCTGGCGCGCCG 134
Query 36488 ACCTGAAGCGCGACGCGATCGAGGATCTGCGCAAGGCACGGTTCTACATCGACCGTGAAA 36547
|| | ||| |||| || | ||||| || ||||| ||||||||| | ||||| || |
Sbjct 135 ACATCAAGGGCGAGGCACTGGAGGACTTGAAGAAGGCCCGGTTCTACCTGGACCGGGAGA 194
Query 36548 TC 36549
||
Sbjct 195 TC 196
>seq74518
Length=2537
Score = 113 bits (124), Expect = 2e-20
Identities = 405/616 (66%), Gaps = 32/616 (5%)
Strand=Plus/Minus
Query 25732 GACACGTTGTACGCCGACGTGTCTGAGTGGCAGGTGCCTGTCACCGACGCGTACACCGAC 25791
||||| | | ||||||||| || | | ||||| || ||| |||| ||| | ||
Sbjct 1371 GACACCCTCTTCGCCGACGTCTCCTACTTCCAGGTACCCGTC---GACG---ACAGCTAC 1318
Query 25792 GCCGGCTATCGGGTGCTGTGCATCCGGTCGAACGACGGCACGCACCGTGATGAGGACTGG 25851
||| || | | | |||| ||||| |||||||||||||| ||| || | |||
Sbjct 1317 -CCG--TACCCGATCCTGTCGATCCGTTCGAACGACGGCACATTCCGCGACCCGCACTTC 1261
Query 25852 GCGAACAACTTCGCGTGGTGCAAGCGCGCGGTCGACGACGGCCGGCTGGCGT-TCTTCAT 25910
|| | |||| ||||||| | ||| ||||| ||| || || ||| || ||
Sbjct 1260 GCACAGAACTACGCGTGGATCCGCCGCAGCCTCGACCGCGGGCGCCTC-CGTGTCGGGAT 1202
Query 25911 CGTGTACTTCGTGTGGCGGCCGAACTGGC---AGGCCGCGGTCGACACGC------TGAA 25961
||| |||| | ||| |||||||||| || ||||| | || || |||
Sbjct 1201 CGTCTACTGCTACCTGCGCCCGAACTGGCTCGAGACCGCGAACACCATGCGGGACATGAT 1142
Query 25962 AGCTCAAGTAGGCGAGCCTCATCCGAAGATGGCCGTGATGCTCGACGTCGAATCATGGAA 26021
| || | |||| | ||||| | | ||| ||||||||||||||||||| |
Sbjct 1141 CGATCGTGCGGGCGGACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGAATCCGG--- 1085
Query 26022 CGGGCAGATCAGCGGCGACCAGTCGGCCGGCATCAAC-GCTGCGTTTGAGCAGATCGCCG 26080
|||| | | ||||||| ||||| | | |||||| || | || | | ||| ||
Sbjct 1084 CGGGAACCCCGGCGGCGATGCGTCGGACTGGATCAACCGCACCTACTG-GAACCTCGTCG 1026
Query 26081 GCTGGTTGGGTGAC--CGC-CGGCGAGTCATCGGATACGGCAACACCGGTGACCTCAACG 26137
| |||| | ||| ||||| || ||||| |||| ||| | | ||| || ||
Sbjct 1025 AATACGCCGGTGGCAACGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCG 966
Query 26138 CGCTGTGGCCGCGGAAGCC-GGAAGGTGTGCGGCTGGTGGTCGCCGGCTACGGGAAGCTG 26196
| |||||| | | ||| || || |||| || | | |||||| |||||
Sbjct 965 GGATGTGGC-GTGTTCGCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAAT 907
Query 26197 CCGA-CCTATCCGGGCATGATCGCCCACCAATACACCGATGGGCAGGGCTACGGCGGTGG 26255
|||| ||| |||| || |||||| ||||| |||||||| || | ||| | |||||| ||
Sbjct 906 CCGAACCTGGCCGGACA-GATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGG 848
Query 26256 CTTGCCTGAAGGCGCACCGCCATTCGGCCGGTGCGACATGAACGCTGCGAACGGACTGAC 26315
| || ||||| |||||||| |||||| |||||||||||| | || |||| || ||
Sbjct 847 ACTCCCCGAAGGGGCACCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGGCCTCAC 788
Query 26316 CGCGTCTGAGTTCGCG 26331
|| | ||||||||
Sbjct 787 GGCCGATCAGTTCGCG 772
>seq20617
Length=36039
Score = 95.1 bits (104), Expect = 5e-15
Identities = 122/166 (73%), Gaps = 2/166 (1%)
Strand=Plus/Minus
Query 36376 GTGAACCA-CCCGGCGCACTACACGTCGCATCCCAGCGGAGTCGAGTGCATCACCGTCAC 36434
||| |||| ||| || |||||||| |||| |||| || ||||||||||| ||||
Sbjct 28233 GTGCACCAGCCCAGC-CACTACACCGCGCACGCCAGTGGGATCGAGTGCATCGAGATCAC 28175
Query 36435 TGAGCACATGGGCTTCAACCTCGGCAACGCCGTTAAGTACATCTGGCGCTGCGACCTGAA 36494
|||||||| |||| | | |||||||| | ||||||||||||||| | || ||
Sbjct 28174 CAAGCACATGAACTTCTGCTTGGGCAACGCGATGAAGTACATCTGGCGCGCTGGGCTCAA 28115
Query 36495 GCGCGACGCGATCGAGGATCTGCGCAAGGCACGGTTCTACATCGAC 36540
| ||||| | ||||||||||||||||| | |||||||||
Sbjct 28114 GGGCGACAGTGTGGAGGATCTGCGCAAGGCCAAGCAGTACATCGAC 28069
>seq47396
Length=7053
Score = 86.0 bits (94), Expect = 3e-12
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 593 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 649
|||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 4060 TAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTG 4116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 199959259746337
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |