Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028953.1
Length=110764
Score E
Sequences producing significant alignments: (Bits) Value
seq68307 212 4e-50
seq24208 185 6e-42
seq101977 152 4e-32
seq216206 104 2e-17
seq50100 89.7 4e-13
seq145472 82.4 5e-11
>seq68307
Length=2902
Score = 212 bits (234), Expect = 4e-50
Identities = 262/358 (73%), Gaps = 3/358 (1%)
Strand=Plus/Plus
Query 97168 GACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCG 97227
|||| | ||| ||||| |||||| | ||| |||||||| |||||||||| |
Sbjct 1678 GACCACGGCCGAGATCTCCTCGTCGGTGATGAACGCGCCCTGCATCCGGATGGGGCGGTT 1737
Query 97228 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97287
||| |||| || | ||| | ||||| ||||| || ||||||| ||| || || ||
Sbjct 1738 CGCGCCCATCGGGATGAAGAGTCCGTCGCCCATGCCGATGAGCTTCTCCGCGCCCGGCTG 1797
Query 97288 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97347
|| ||||| || || ||||| || || | || ||||||| ||||| ||||| ||
Sbjct 1798 ATCGAGGATGACGCGCGAGTCGGTCAGCGACGACGTCGCGAACGCGAGCCGCGACGGGAC 1857
Query 97348 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97407
||||| ||||| ||||| ||||| || || || || || ||||| ||||| || || ||
Sbjct 1858 GTTGGTCTTGATCAGGCCGGTGACGACGTCGACCGACGGTCGCTGGGTCGCGAGCACCAG 1917
Query 97408 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97467
|| ||||| || ||||| |||||||||| ||||||||| || | ||||||| ||
Sbjct 1918 GTGGATACCCGCCGCGCGGGCCTTCTGGGTGATGCGGACGATCGCGTCCTCGACGTC--- 1974
Query 97468 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97525
|||| || |||||||||||| ||||| |||||||| | ||| ||||||||||
Sbjct 1975 CTTGGGCGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGATGGCCAGGATGTAGGGG 2032
Score = 123 bits (136), Expect = 2e-23
Identities = 133/176 (76%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 97652 AGGTGGGGGATACCGTTGTACGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGT 97711
|| || ||||| || | |||||| || ||||| ||||||||||||||||| | ||| |
Sbjct 2219 AGATGCGGGATGCCCTCGTACGGCGTCAGTTCGACCATCTTCGGGTCGATGAGGATCATC 2278
Query 97712 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 97771
||| || || | || ||| |||| || |||| ||||||||| | |||||||
Sbjct 2279 CGGACGTCGTCCGGGGTCGCCCGGGTCAGCAGTGACACCAACATCGAGTTCACGAAGCTG 2338
Query 97772 GACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGGTGCGGCATTTTGGCCAGGTT 97827
||||| || || ||||||| ||| || || |||||||| ||||| ||||| |||||
Sbjct 2339 GACTTGCCCGAACCGGTGGAGCCGGCGACGAGCAGGTGGGGCATCTTGGCGAGGTT 2394
>seq24208
Length=1566
Score = 185 bits (204), Expect = 6e-42
Identities = 221/298 (74%), Gaps = 3/298 (1%)
Strand=Plus/Plus
Query 97228 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97287
|||||||| || ||||| | |||||| ||| || | |||| |||||| || ||
Sbjct 431 CGCCCCCATCGGGAGGAACAGCCCGTCGCCCTGGCCGACCAGCTTCTCGGCGCCCGGCTG 490
Query 97288 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97347
||| ||||| |||||||| ||| ||| | |||||||| | ||| | ||||||||
Sbjct 491 GTCGAGGATGACCCGGCTGTCGCCGAGGCTCGACGTGGCGAAGGCGAGTCGCGACGGCAC 550
Query 97348 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97407
||||| ||||| || || || || |||||||| || |||||||||||||| || |||||
Sbjct 551 GTTGGCCTTGATCAGACCCGTCACCACATCCACCGACGGCCGCTGCGTCGCGAGCACGAG 610
Query 97408 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97467
|| || ||||| |||||||| ||||| |||||| || || ||||||| ||
Sbjct 611 GTGGATGCCGGCGGCGCGCGCGAGCTGGGTGATGCGCACGATCGACTCCTCGACGTC--G 668
Query 97468 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97525
| | | || ||||||| ||||| || || ||||||||||| |||| || |||||||
Sbjct 669 CGCGGCG-CGACCATCATCAGGTCGGCCAGCTCGTCGACCACGACCAGGAGGTAGGGG 725
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 97753 CATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGGTGCGG 97812
|||||||||||||||||| ||||| || |||||||||| ||| || || |||||||||||
Sbjct 1013 CATCGAGTTGATGAAGCTCGACTTGCCGGATCCGGTGGAGCCGGCGACGAGCAGGTGCGG 1072
Query 97813 CATTTTGGCCAGGTTC 97828
||| || || ||||||
Sbjct 1073 CATCTTCGCGAGGTTC 1088
>seq101977
Length=1174
Score = 152 bits (168), Expect = 4e-32
Identities = 189/254 (74%), Gaps = 5/254 (2%)
Strand=Plus/Plus
Query 97273 CTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCTG-TGGCGAACG 97331
|||||| || || ||| ||||| || || || ||||| || || |||| ||||||| |
Sbjct 3 CTCGGCGCCCGGCTGGTCGAGGATGACGCGACTGTCGGTCAGCGA-GCTGGTGGCGAAGG 61
Query 97332 AGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCT 97391
| || | || |||||||||| ||||| || || ||||| || || ||||||||||| |
Sbjct 62 ACAGTCGGGAGGGCACGTTGGTCTTGATCAGACCGGTGACGACGTCGACGGAGGGCCGTT 121
Query 97392 GCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGT 97451
| || || ||||| || || || ||||| || || |||||||||| ||| ||||| ||
Sbjct 122 GGGTGGCGAGGACCAGGTGGATCCCGGCGGCCCGGGCCTTCTGGGTGATCCGGACGATCG 181
Query 97452 TGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTA 97511
| ||||||| || | | ||||| |||||| ||||| ||||| ||||||| |
Sbjct 182 CGTCCTCGACGTC--CCGCGGAGCCG-TCATCATCAGGTCGGCGAGCTCGTCGATGATCC 238
Query 97512 CCACGATGTAGGGG 97525
||| |||||| |||
Sbjct 239 CCAGGATGTACGGG 252
Score = 143 bits (158), Expect = 2e-29
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 97628 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGGGGTGAGTTCCACC 97687
|||| ||||| | ||| || ||||| ||||| || | |||||| ||||| || |||
Sbjct 415 GGCTGGGTGATGATCGGGGTCAGCAGGTGCGGGATGCCCTCGTACGGCGTGAGCTCGACC 474
Query 97688 ATCTTCGGGTCGATCATGATGAGTTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 97747
||||| |||||||||| | | |||| | || ||| || | |||| ||
Sbjct 475 ATCTTGGGGTCGATCAGCACCATCCGGACCTCGGCCGGCGAGGCCCGCTGCAGCAGCGAG 534
Query 97748 ACCAGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGG 97807
|||||||||||||| | |||||||||||| || || ||||||||||| ||||||||||||
Sbjct 535 ACCAGCATCGAGTTCACGAAGCTGGACTTGCCGGAACCGGTGGCGCCGGCCACCAGCAGG 594
Query 97808 TGCGGCATTTTGGCCAGGTTCA 97829
||||| | |||||||||||||
Sbjct 595 TGCGGGGTCTTGGCCAGGTTCA 616
>seq216206
Length=797
Score = 104 bits (114), Expect = 2e-17
Identities = 362/553 (65%), Gaps = 29/553 (5%)
Strand=Plus/Plus
Query 99904 GTCGAGCTTGGGGAAATCAGGCTCGCGGATCTCATCTGGCCACCGCAGCGTCTGCAACGT 99963
||||||| ||||| || | |||||| | ||| || ||| |||||||||||| |
Sbjct 4 GTCGAGCCCCGGGAACTCGGCCTCGCGCACCTCGTCGTCCCAGAGCAGCGTCTGCAGCAG 63
Query 99964 CAGAACCTCATTCTTGCCCGTCACACGCAACACCGCCAG--GTGTTCCTTGCTCCGCAGG 100021
||| ||||| | | ||| || |||| | ||||||| | || | |||| |||||
Sbjct 64 CAGCACCTCGT-CGTGC-----ACTCGCAGCGCCGCCAGCCGGGTGCGTTGC--CGCAGC 115
Query 100022 GTTACCCGTACGATGGCGACCTTGC---CGGCGTCAGAGAGCGTCCTAGCCAGCAGAGCG 100078
| | || ||||| || | ||| ||| || ||||| | |||||| |||
Sbjct 116 GAGATGCGCACGATCGC---CGTGCGCTCGGTCTCCTCCAGCGTGCGGCGCAGCAGCGCG 172
Query 100079 TAGGGCCGCACCGAGCCCTC-TACGTT--CAGGTAGTAGGGCTTGTCGAGCATGATCGGG 100135
|| | | || ||||| | || ||||||||| |||||| |||||
Sbjct 173 TACGCCTTCATCGAGCTGGAATCCGGCGCCAGGTAGTAACTGCGGTCGAGGCGGATCGCA 232
Query 100136 TCGACCTCCCCGGCCGGCACGAACTCTACGACGTCAATCACCTTGTTGGTTTCGCTGGGC 100195
|| |||| | | | ||||||||||| |||||||| || | | || ||| |||
Sbjct 233 TCCACCTGCTCCGAGGGCACGAACTCGACGACGTCGATGTCGCGGCTGCGCTCGGCCGGC 292
Query 100196 AGCTCTGCCAAGTCCTCATTGGTCAGTAGGGCGGTTTGCCCGTCGACCTCGAACACCTTG 100255
||| |||| || || ||| | || | | | || | || || | ||| | |||||
Sbjct 293 AGCGACGCCAGATCGTCCTTGCTGAGCACGACCGTGCGGTCGCCGTCGTCGTAGGCCTTG 352
Query 100256 CCCAGATCGGC-CGTGTGG-ACCTGCTCACCGCAGCATTCACAGATCTTG---TGATACT 100310
| ||| || || || || ||| |||||| || || |||| || ||
Sbjct 353 TC--GATGTGCTCGAAGGGCACGACCTCGCCGCAGATCTCGCA---CTTGCGCTGGTAGC 407
Query 100311 TGATCCGCCCGCCGTCCTGGACGTGCGCCAGATGGCCCTTCAGGTCGTGCTCTTCGGTGG 100370
||| ||||||| ||| | | ||||| || |||| | || |||||| ||||| ||||
Sbjct 408 GGATGCGCCCGCTGTCGTCGTCGTGCACCTGATGCAGCGGCACGTCGTGGTCTTCCGTGG 467
Query 100371 CCGCGTACATCTTCACCGGCACGTTGACCAACCCGAAGTTGACCGCGCCTGTCCAAACCG 100430
||| | | | ||| || ||||||||||||| ||||||| | | || ||| |||| | ||
Sbjct 468 CCGAGAAGAGCTTGACGGGCACGTTGACCAGCCCGAAGCTCAGCGAGCCCTTCCAGATCG 527
Query 100431 CTCTCATGCCTGC 100443
| ||||| |||||
Sbjct 528 CCCTCATTCCTGC 540
>seq50100
Length=1361
Score = 89.7 bits (98), Expect = 4e-13
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 51807 TCACCCCGCACGACCTCCGGCACACCTGCGCCTCGCTGGCCATCTCCTCCGGCGCCAACG 51866
|||| ||||||||||| ||||||||| |||||||| || ||||| | ||||| ||||
Sbjct 266 TCACTCCGCACGACCTGCGGCACACCGCTGCCTCGCTCGCTATCTCGGCGGGCGCGAACG 207
Query 51867 TCAAGGCGGTCCAGAACCTTCTGGGACAC 51895
||||||| ||||||| | | || ||||||
Sbjct 206 TCAAGGCCGTCCAGACCATGCTCGGACAC 178
>seq145472
Length=1506
Score = 82.4 bits (90), Expect = 5e-11
Identities = 249/375 (66%), Gaps = 21/375 (6%)
Strand=Plus/Minus
Query 99793 CAGTTCCACCTTGTAGGTGTCCTGGTACTTGTCAGGGTTGAACGGCGC-GGACAGCTCAT 99851
||| || | || ||||||||||| ||||| |||| ||| | ||| || || | |
Sbjct 1319 CAGCTCGAGCTGGTAGGTGTCCTCGTACTCCGACGGGTCGAA-GTCGCCGGCCATCGTCT 1261
Query 99852 CAACGAGCATCGCCGCCACCTTCAGCTCAGCCTCGGACAGTTC--CGGCTTGTTGTCGAG 99909
| | ||| |||||||| || || || | ||| | | || ||| | || ||||||
Sbjct 1260 CGATCAGCGACGCCGCCATCTCGAGTTC--CTGCGGCCGGATCGTCGGTTCGTCGTCGAG 1203
Query 99910 CTTGGGGAAATCAGGCTCGCGGATCTCATCTGGCCACCGCAGCGTCTGCAACGTCAGAAC 99969
|||||| || | || |||| ||| || |||||| |||| ||||||| || || ||
Sbjct 1202 TGCGGGGAACTCGGCCTGCCGGACCTCGTCGGGCCACAGCAGTGTCTGCAGCGACATCAC 1143
Query 99970 CTCATTCTTGCCCGTCACACGCAACACCGCCAGGTGTTCCTTGCTCCGCAGGGTTACCCG 100029
| ||||| ||| |||| | ||||| || | | | ||||| || | |
Sbjct 1142 GT------TGCCCACCACCCGCAGTGCGGCCAGACGTGTCCGGTTGCGCAGCGTGAACGT 1089
Query 100030 TACGATGGCGACCTTGCCGGCGTCAGAGAGCGTCCTAGC-CAGCAGAGCGTAGGGCCGCA 100088
|||| || | | | ||| ||| | ||||| ||| | |||||| |||||| | |
Sbjct 1088 GGCGATCGCCAGCCGGTCGGTGTCGGCGAGCG-CCTGCCGCAGCAGCACGTAGGCCTTCG 1030
Query 100089 CCGAGCCCTCTACGT----TC-AGGTAGTAGGGCTTGTCGAGCATGATCGGGTCGACCTC 100143
|| | || ||| || ||||||||||||||||||| ||||||||||||||
Sbjct 1029 GTGA--CTTCGACGCCGGCTCGAGGTAGTAGGGCTTGTCGAAGTAGATCGGGTCGACCTG 972
Query 100144 CCCGGCCGGCACGAA 100158
| | |||||||||
Sbjct 971 GTCCGACGGCACGAA 957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 353123479408175
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