Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_028979.1 Length=57253 Score E Sequences producing significant alignments: (Bits) Value seq74518 168 2e-37 seq156590 80.6 1e-10 >seq74518 Length=2537 Score = 168 bits (186), Expect = 2e-37 Identities = 392/584 (67%), Gaps = 19/584 (3%) Strand=Plus/Minus Query 26527 CGACACGCTGTACGCCGACGTGTCCGAGTGGCAGCGGCCCGTCGACGACAGCTACCCGTA 26586 |||||| || | ||||||||| ||| | | ||| ||||||||||||||||||||||| Sbjct 1372 CGACACCCTCTTCGCCGACGTCTCCTACTTCCAGGTACCCGTCGACGACAGCTACCCGTA 1313 Query 26587 CCGCGTGCTGTGCATCCGGTCGAACGACGGCACCTACCGCGACAAG-AAGTGGCACATCA 26645 || | |||| ||||| |||||||||||||| | ||||||| | | | ||||| | Sbjct 1312 CCCGATCCTGTCGATCCGTTCGAACGACGGCACATTCCGCGACCCGCACTTCGCACA-GA 1254 Query 26646 ACTACCCGTGGTGCAAGCGCGCTGTCGACGACGGCCGCCTGGCGT-TCTTCATCGTCTAC 26704 ||||| ||||| | ||| ||||| ||| ||||| ||| || ||||||||| Sbjct 1253 ACTACGCGTGGATCCGCCGCAGCCTCGACCGCGGGCGCCT-CCGTGTCGGGATCGTCTAC 1195 Query 26705 TTCGTGTGGCGGCCGAATTGGCGCGA---CGCCGTCGCCACGCTGAA----ATCG--CAA 26755 | | ||| ||||| |||| ||| ||| | ||| || | | |||| | Sbjct 1194 TGCTACCTGCGCCCGAACTGGCTCGAGACCGCGAACACCATGCGGGACATGATCGATCGT 1135 Query 26756 GTGGGCGAGCCGCACCCAAAGATGGCCGTGATGATCGACGTTGAGAGCTGGGGCGGCCAG 26815 | ||||| | ||| |||| | ||| ||||| ||||||| || | ||||| | Sbjct 1134 GCGGGCGGACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGA---ATCCGGCGGGAAC 1078 Query 26816 ATCGGCGGCAACCAGTCGGCCGGGATCAACGCGGCCTATGACGAGATTGCCGCGT-GGCT 26874 ||||||| | ||||| | |||||||| |||| | | | || | || Sbjct 1077 CCCGGCGGCGATGCGTCGGACTGGATCAACCGCACCTACTGGAACCTCGTCGAATACGCC 1018 Query 26875 G--GGCGATCACCGCCGGGTAATCGGCTACGGAAACGTCGGCGACCTCGACCGGCTGTGG 26932 | ||| | || ||||| |||||||||| |||| | |||| ||| | || ||||| Sbjct 1017 GGTGGCAACGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGG 958 Query 26933 CCGCAGAAGCCGCCGGGCATCCGGCTCGTCGTCGCCGGGTACGGGCGGCTGCCGAGCTAC 26992 | ||| ||||| | || | ||| |||||| ||||| || |||| | Sbjct 957 CGTGTTCGCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAACCTG 898 Query 26993 CCCGGCATGATCGCGCACCAATACACGGACGGCGGCGGCTNNNNNNNNNNCCTGCCCGAA 27052 |||| |||||||||||| ||||| |||||| | || | || |||||| Sbjct 897 GCCGGACAGATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGAA 838 Query 27053 GGTGCGCCACCGTTCGGCAACTGCGACATGAACGCTGCCAACGG 27096 || || || |||||||||||||||||||||||| | ||| |||| Sbjct 837 GGGGCACCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGG 794 >seq156590 Length=1116 Score = 80.6 bits (88), Expect = 1e-10 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 44312 CCCGGCGGCGTCGTGCTCGACCCGTTCCACGGTTCCGGCACAACGGGTCTGGTGGCGCTC 44371 ||||||| ||| ||||||||||||||| ||| ||||||| |||||| ||||||| Sbjct 507 CCCGGCGACGTGGTGCTCGACCCGTTCTTCGGCACCGGCACGACGGGTGCGGTGGCGAAG 448 Query 44372 GGTCTCGGCCGCCGCTACGTCGGCATCGA 44400 | ||||||||| ||| |||||||||| Sbjct 447 CGGCTCGGCCGCAGCTGGATCGGCATCGA 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182485574453890