Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_028979.1
Length=57253
Score E
Sequences producing significant alignments: (Bits) Value
seq74518 168 2e-37
seq156590 80.6 1e-10
>seq74518
Length=2537
Score = 168 bits (186), Expect = 2e-37
Identities = 392/584 (67%), Gaps = 19/584 (3%)
Strand=Plus/Minus
Query 26527 CGACACGCTGTACGCCGACGTGTCCGAGTGGCAGCGGCCCGTCGACGACAGCTACCCGTA 26586
|||||| || | ||||||||| ||| | | ||| |||||||||||||||||||||||
Sbjct 1372 CGACACCCTCTTCGCCGACGTCTCCTACTTCCAGGTACCCGTCGACGACAGCTACCCGTA 1313
Query 26587 CCGCGTGCTGTGCATCCGGTCGAACGACGGCACCTACCGCGACAAG-AAGTGGCACATCA 26645
|| | |||| ||||| |||||||||||||| | ||||||| | | | ||||| |
Sbjct 1312 CCCGATCCTGTCGATCCGTTCGAACGACGGCACATTCCGCGACCCGCACTTCGCACA-GA 1254
Query 26646 ACTACCCGTGGTGCAAGCGCGCTGTCGACGACGGCCGCCTGGCGT-TCTTCATCGTCTAC 26704
||||| ||||| | ||| ||||| ||| ||||| ||| || |||||||||
Sbjct 1253 ACTACGCGTGGATCCGCCGCAGCCTCGACCGCGGGCGCCT-CCGTGTCGGGATCGTCTAC 1195
Query 26705 TTCGTGTGGCGGCCGAATTGGCGCGA---CGCCGTCGCCACGCTGAA----ATCG--CAA 26755
| | ||| ||||| |||| ||| ||| | ||| || | | |||| |
Sbjct 1194 TGCTACCTGCGCCCGAACTGGCTCGAGACCGCGAACACCATGCGGGACATGATCGATCGT 1135
Query 26756 GTGGGCGAGCCGCACCCAAAGATGGCCGTGATGATCGACGTTGAGAGCTGGGGCGGCCAG 26815
| ||||| | ||| |||| | ||| ||||| ||||||| || | ||||| |
Sbjct 1134 GCGGGCGGACTGCATCCAAGGGTGGTGCTGATGCTCGACGTCGA---ATCCGGCGGGAAC 1078
Query 26816 ATCGGCGGCAACCAGTCGGCCGGGATCAACGCGGCCTATGACGAGATTGCCGCGT-GGCT 26874
||||||| | ||||| | |||||||| |||| | | | || | ||
Sbjct 1077 CCCGGCGGCGATGCGTCGGACTGGATCAACCGCACCTACTGGAACCTCGTCGAATACGCC 1018
Query 26875 G--GGCGATCACCGCCGGGTAATCGGCTACGGAAACGTCGGCGACCTCGACCGGCTGTGG 26932
| ||| | || ||||| |||||||||| |||| | |||| ||| | || |||||
Sbjct 1017 GGTGGCAACGCTCGGCGGGTGATCGGCTACGCGAACGCGGCCGACTTCGCCGGGATGTGG 958
Query 26933 CCGCAGAAGCCGCCGGGCATCCGGCTCGTCGTCGCCGGGTACGGGCGGCTGCCGAGCTAC 26992
| ||| ||||| | || | ||| |||||| ||||| || |||| |
Sbjct 957 CGTGTTCGCCCGGCGGGCCTGCGAATGATCGGCGCCGGTTACGGCCGCAATCCGAACCTG 898
Query 26993 CCCGGCATGATCGCGCACCAATACACGGACGGCGGCGGCTNNNNNNNNNNCCTGCCCGAA 27052
|||| |||||||||||| ||||| |||||| | || | || ||||||
Sbjct 897 GCCGGACAGATCGCGCACCAGTACACCGACGGCCGGGGTTTCGGCGGCGGACTCCCCGAA 838
Query 27053 GGTGCGCCACCGTTCGGCAACTGCGACATGAACGCTGCCAACGG 27096
|| || || |||||||||||||||||||||||| | ||| ||||
Sbjct 837 GGGGCACCGCCGTTCGGCAACTGCGACATGAACTCCGCCGACGG 794
>seq156590
Length=1116
Score = 80.6 bits (88), Expect = 1e-10
Identities = 71/89 (80%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 44312 CCCGGCGGCGTCGTGCTCGACCCGTTCCACGGTTCCGGCACAACGGGTCTGGTGGCGCTC 44371
||||||| ||| ||||||||||||||| ||| ||||||| |||||| |||||||
Sbjct 507 CCCGGCGACGTGGTGCTCGACCCGTTCTTCGGCACCGGCACGACGGGTGCGGTGGCGAAG 448
Query 44372 GGTCTCGGCCGCCGCTACGTCGGCATCGA 44400
| ||||||||| ||| ||||||||||
Sbjct 447 CGGCTCGGCCGCAGCTGGATCGGCATCGA 419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 182485574453890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |