Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_029077.1 Length=52155 Score E Sequences producing significant alignments: (Bits) Value seq4597 118 4e-22 >seq4597 Length=157418 Score = 118 bits (130), Expect = 4e-22 Identities = 239/351 (68%), Gaps = 23/351 (7%) Strand=Plus/Plus Query 34457 GAGTAGTTAGCCCCGACTCCCCCGCCCTCCATCAGGCGCATGAACGTGA---ACTCGAAG 34513 |||||||| || ||||| || |||||||| | ||| || | ||| || ||| |||| Sbjct 124971 GAGTAGTTGGCGCCGACACCGCCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAG 125027 Query 34514 TGGTCCTCGATCTTCTCTGGCCAGCCGGCCACCCAGCAGTTG------AACAGGTGCTGA 34567 ||||| | |||| | | ||| |||| || | |||||| ||| ||| | | Sbjct 125028 TGGTCACTGGTCTTTGCCGACCATCCGGAGACGAAACAGTTGCGAGAGAACGGGTTC--A 125085 Query 34568 GCGTTCTTTACACCCGACGCCCACAGGTGACGGCCTGCCGGGAGGATCTTGAACTCCGAC 34627 |||| | | |||||||||| || || |||||||| |||||||| | | Sbjct 125086 CGGTTC-------CGGTGACCCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAG 125138 Query 34628 ATCAGTCGGATCAGTTCTTCACGCTCACCAGGGTTTT-GGTACCGTTCGGGTACCAGAGC 34686 ||||| || || || |||||||| ||| ||| | |||| || | Sbjct 125139 ATCAGGTCGAACAAATCCTCACGCTCGTTCGGGAGCCAGGTTGAGGACGGGACGTAGC-C 125197 Query 34687 CAGGTTTCCGTCAACGACACGTGCGACGGTCTCGGGCCAGGTCTCCTTGGTCCCGTCAGG 34746 |||||| ||||| || ||||||| |||||||||| ||| |||||||| || |||||||| Sbjct 125198 CAGGTTGCCGTCGACCACACGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGG 125257 Query 34747 CTTGGTTCTGGCGTAGGTCCGGTTGTATACGAGCTCTCCGGTTGGTCCCCA 34797 |||| | | ||||||||||| |||||| || ||| | |||||||| Sbjct 125258 CTTGATGCGACTGTAGGTCCGGTCGTATACCTCCTTGCCGATCGGTCCCCA 125308 Score = 96.9 bits (106), Expect = 1e-15 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 33889 GAACTCGTCATCGACCTCGACCGAGATGTTCGTCGTCCAGTGCTTT--CCTGACGCCGAC 33946 |||| ||| || |||||||| ||||||||||| |||||||| | || | || | | Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGC--C 124469 Query 33947 TTGCAGTTGATGAACTCGTAGATCTGGGGATCTTTCCAGTGCATCATCGACATCCGAGCA 34006 |||||||||||||| ||| ||| | || || | |||| |||||| | ||| || || Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529 Query 34007 GATCGGCGAACACCGCCGGCTACCACACACGAAGCAATGGCGTGATCGATCTCCATCGCG 34066 || || || |||| || || || || | | || ||| |||| ||||||| ||| || Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCC 124589 Query 34067 GTGATGCCG 34075 ||||||| Sbjct 124590 TCGATGCCG 124598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166225652080982