Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_029077.1
Length=52155
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 118 4e-22
>seq4597
Length=157418
Score = 118 bits (130), Expect = 4e-22
Identities = 239/351 (68%), Gaps = 23/351 (7%)
Strand=Plus/Plus
Query 34457 GAGTAGTTAGCCCCGACTCCCCCGCCCTCCATCAGGCGCATGAACGTGA---ACTCGAAG 34513
|||||||| || ||||| || |||||||| | ||| || | ||| || ||| ||||
Sbjct 124971 GAGTAGTTGGCGCCGACACCGCCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAG 125027
Query 34514 TGGTCCTCGATCTTCTCTGGCCAGCCGGCCACCCAGCAGTTG------AACAGGTGCTGA 34567
||||| | |||| | | ||| |||| || | |||||| ||| ||| | |
Sbjct 125028 TGGTCACTGGTCTTTGCCGACCATCCGGAGACGAAACAGTTGCGAGAGAACGGGTTC--A 125085
Query 34568 GCGTTCTTTACACCCGACGCCCACAGGTGACGGCCTGCCGGGAGGATCTTGAACTCCGAC 34627
|||| | | |||||||||| || || |||||||| |||||||| | |
Sbjct 125086 CGGTTC-------CGGTGACCCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAG 125138
Query 34628 ATCAGTCGGATCAGTTCTTCACGCTCACCAGGGTTTT-GGTACCGTTCGGGTACCAGAGC 34686
||||| || || || |||||||| ||| ||| | |||| || |
Sbjct 125139 ATCAGGTCGAACAAATCCTCACGCTCGTTCGGGAGCCAGGTTGAGGACGGGACGTAGC-C 125197
Query 34687 CAGGTTTCCGTCAACGACACGTGCGACGGTCTCGGGCCAGGTCTCCTTGGTCCCGTCAGG 34746
|||||| ||||| || ||||||| |||||||||| ||| |||||||| || ||||||||
Sbjct 125198 CAGGTTGCCGTCGACCACACGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGG 125257
Query 34747 CTTGGTTCTGGCGTAGGTCCGGTTGTATACGAGCTCTCCGGTTGGTCCCCA 34797
|||| | | ||||||||||| |||||| || ||| | ||||||||
Sbjct 125258 CTTGATGCGACTGTAGGTCCGGTCGTATACCTCCTTGCCGATCGGTCCCCA 125308
Score = 96.9 bits (106), Expect = 1e-15
Identities = 136/189 (72%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 33889 GAACTCGTCATCGACCTCGACCGAGATGTTCGTCGTCCAGTGCTTT--CCTGACGCCGAC 33946
|||| ||| || |||||||| ||||||||||| |||||||| | || | || | |
Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGC--C 124469
Query 33947 TTGCAGTTGATGAACTCGTAGATCTGGGGATCTTTCCAGTGCATCATCGACATCCGAGCA 34006
|||||||||||||| ||| ||| | || || | |||| |||||| | ||| || ||
Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529
Query 34007 GATCGGCGAACACCGCCGGCTACCACACACGAAGCAATGGCGTGATCGATCTCCATCGCG 34066
|| || || |||| || || || || | | || ||| |||| ||||||| ||| ||
Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCC 124589
Query 34067 GTGATGCCG 34075
|||||||
Sbjct 124590 TCGATGCCG 124598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 166225652080982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |