Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq61277 118 9e-22 seq76033 102 7e-17 seq263247 95.1 1e-14 >seq61277 Length=456 Score = 118 bits (130), Expect = 9e-22 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 |||||||| || ||||||||| | || | ||| ||||||||||| | || |||| || Sbjct 214 ATGGCGCTACCGCCGTGCCACTCGCTGTTCCAGTTCTACGTCGCCGACGGCAAGCTCTCG 273 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 |||||||| || ||||| |||| ||| | | ||||||||||||||||| || Sbjct 274 TGCCAGCTGTACCAACGCTCGGCGGACGTCTTCCTCGGGGTGCCGTTCAACATCGCGTCC 333 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTG 34756 ||||| ||||| | || || |||| || || || || || || || || | | Sbjct 334 TACGCCCTGCTGGTGCACCTGGTCGCCCAGGTGGTCGGTCTGCAACCGGGCGACTTCATC 393 Query 34757 CATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTG 34816 || || |||| |||||||| | ||| |||||| |||||| | |||| | |||||| Sbjct 394 CACACCCTGGGCGATGCGCACCTGTACTCCAACCACCTCGAGCAGGCCCGGTTGCAGCTG 453 Score = 118 bits (130), Expect = 9e-22 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 6529 CAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATG 6588 |||||| | |||| | |||||| |||||| ||| | |||||||| |||| || || Sbjct 453 CAGCTGCAACCGGGCCTGCTCGAGGTGGTTGGAGTACAGGTGCGCATCGCCCAGGGTGTG 394 Query 6589 CACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTA 6648 | | || || || || || || || || |||| || || | ||||| ||||| Sbjct 393 GATGAAGTCGCCCGGTTGCAGACCGACCACCTGGGCGACCAGGTGCACCAGCAGGGCGTA 334 Query 6649 ACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCA 6708 || ||||||||||||||||| | | ||| |||| ||||| || |||||||| Sbjct 333 GGACGCGATGTTGAACGGCACCCCGAGGAAGACGTCCGCCGAGCGTTGGTACAGCTGGCA 274 Query 6709 GGACAGCTCCCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 || |||| || | ||||||||||| ||| | || | ||||||||| || |||||||| Sbjct 273 CGAGAGCTTGCCGTCGGCGACGTAGAACTGGAACAGCGAGTGGCACGGCGGTAGCGCCAT 214 >seq76033 Length=7108 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 34549 CGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCA 34608 ||| |||||| | ||| |||| | ||||||| | || ||||||||| || ||| ||| Sbjct 6285 CGCCTGGAACGTGGGGGAGATCCCGCAGATGGCGTTGCCGCCGTGCCACGCCTTCTTCCA 6344 Query 34609 ATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGG 34668 ||||||||||| | || | || ||||||||||||||||| || | ||| || Sbjct 6345 GTTCTACGTCGCCGACGGAAAACTCTCCTGCCAGCTCTATCAGCGCAGTGCCGACCTGTT 6404 Query 34669 GTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGC 34722 | || |||||||||||||| || || || |||||||| ||||||| || Sbjct 6405 CCTCGGTGTGCCGTTCAACATCGCGTCCTATGCCCTGCTCACCCACATGATGGC 6458 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 6623 GCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATG 6682 || ||||||| |||||||| || || || |||||||||||||| || | || | Sbjct 6458 GCCATCATGTGGGTGAGCAGGGCATAGGACGCGATGTTGAACGGCACACCGAGGAACAGG 6399 Query 6683 TCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAG 6742 || | || ||||||||||||||||| || | || | ||||||||||| ||| || Sbjct 6398 TCGGCACTGCGCTGATAGAGCTGGCAGGAGAGTTTTCCGTCGGCGACGTAGAACTGGAAG 6339 Query 6743 AGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 | || ||||||||| || | ||||||| | |||| ||| | |||||| ||| Sbjct 6338 AAGGCGTGGCACGGCGGCAACGCCATCTGCGGGATCTCCCCCACGTTCCAGGCG 6285 >seq263247 Length=570 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || |||| |||| |||||||| ||||| || || |||||||||||||| || | Sbjct 253 TGCGCGAGGATGTGGGTGAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGAAG 312 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| ||||| || || ||||||||| ||||||| || |||||||||| ||| Sbjct 313 ATGTCGCCCGAGCGCTGGTAGAGCTGGAGCGACAGCTTGCCGTTCGCGACGTGCGTCTGG 372 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATC 6769 | ||| ||||| || | |||||||||| Sbjct 373 AACAGGCAATGGCAGGGTGCGAGCGCCATC 402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635 |||||||||| | || ||||| ||| | ||| |||||||||| || ||||||| Sbjct 402 GATGGCGCTCGCACCCTGCCATTGCCTGTTCCAGACGCACGTCGCGAACGGCAAGCTGTC 343 Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 ||||||||| || || ||||| ||||| | || |||||||||||||| || || Sbjct 342 GCTCCAGCTCTACCAGCGCTCGGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAG 283 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| |||||||| |||| |||| || Sbjct 282 CTACGCGCTGCTCACCCACATCCTCGCGCA 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446709826367760