Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq28654 102 6e-17
>seq28654
Length=3315
Score = 102 bits (112), Expect = 6e-17
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|||||||| || ||||||||||| ||||| || ||| ||||| | || || |||
Sbjct 2617 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 2558
Query 27847 ACCG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||| || || | ||| || ||| ||||| ||||| ||||| |||| |
Sbjct 2557 TCCGATACTATTGAAAAT--GTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAG 2500
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||||| || ||||| || ||||| |||||||| |||| ||||| | || || |
Sbjct 2499 ATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACT 2440
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
| || || |||||||| ||| | || ||||| |||||| | ||||| ||
Sbjct 2439 ATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGG 2388
Score = 89.7 bits (98), Expect = 4e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| ||||| || ||||| ||| ||||| | || || ||| |
Sbjct 2158 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 2099
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || | ||| || ||| ||||| ||||||||||| |||| ||| |
Sbjct 2098 GACACAATTGAAAAT--GTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATC 2041
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||||| | |||||||| || || ||||| || || | || | |||| || ||||
Sbjct 2040 AACAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACA 1981
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTT 28007
||||||||||||| |||||||| || || | |||||
Sbjct 1980 ACATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTT 1941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354660670801941
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |