Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq28654 154 3e-32
seq27512 143 6e-29
seq27511 141 2e-28
seq76306 125 2e-23
seq185851 87.8 4e-12
>seq28654
Length=3315
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| || |||||||| ||||| || || || | ||||| | ||||||
Sbjct 1035 AGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 1094
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||| || || || ||||||||||| |||||||| || ||||||| ||||||||| ||
Sbjct 1095 TCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 1154
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||| || ||||| |||||||| || ||||| || | ||| || ||
Sbjct 1155 TGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGTTATTGTT 1214
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || || || || ||||| | ||||||
Sbjct 1215 TTTCCAGTAAGTGTTTTGACAAATATTTGCATT 1247
Score = 154 bits (170), Expect = 3e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||| || ||||||||||||||||| || || | ||||| | |||||||| ||||||
Sbjct 1500 TGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCTAGCTGC 1559
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
||||| || |||||||| |||||||| || || |||| || || || || || |||||
Sbjct 1560 TTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCTTGAATCTTA 1619
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| || ||||| ||||||||||| || ||||| ||||| || ||||| || ||
Sbjct 1620 GCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTTATAGTCTTGCCTGTT 1679
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| | |||||
Sbjct 1680 AGTGTCTTGACAAATATTTGCAT 1702
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | |||||||||||| || || ||||| || | || || | ||||| ||||||||
Sbjct 815 GTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGAGTACGGCCATCCTCCAGCTG 874
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|||||| ||||| || || |||||||| || || |||| || || ||||| ||||||||
Sbjct 875 CTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 934
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || ||||| || ||||| ||| |||||| || | ||||| || || || ||
Sbjct 935 AGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGT 994
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|| ||||||||||| | ||||||
Sbjct 995 CAGTGTCTTTACAAAGATCTGCAT 1018
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | || | ||| || ||||||||||||||||| |||| || ||
Sbjct 569 ACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGT 628
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || | ||| || || || ||||| || || |||||||| || |||| ||
Sbjct 629 GCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCC 688
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| |||||||| || || |||||||| ||||| || || ||||| |
Sbjct 689 CTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAA 748
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| || || |||||||| ||||| | ||||||
Sbjct 749 AGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 790
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| | ||| || |||||||||||||| || || | || || | ||||||
Sbjct 1947 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCT 2006
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| | |||||||| || || ||||| |||||||| || ||||||| ||||| |||||
Sbjct 2007 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCT 2066
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || |||||| ||||| || |||||||| |||||| || | ||| || ||
Sbjct 2067 TGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTT 2126
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || ||||| | |||||
Sbjct 2127 TTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 2158
Score = 145 bits (160), Expect = 2e-29
Identities = 167/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | | || | ||||||||| || |||||||| || ||||| || | ||| ||
Sbjct 2393 ACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGT 2452
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||| ||||||| ||||| || ||||| || | |||||||| || ||||||| ||
Sbjct 2453 GCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCC 2512
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||| || || || ||| || ||||| || || || || |||||| || |
Sbjct 2513 TTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAA 2572
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||| || || || ||||| || || || ||||| | |||||||||
Sbjct 2573 AGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 2617
Score = 140 bits (154), Expect = 7e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || ||||| || ||||| ||||||||||| || || | ||||| | ||||||
Sbjct 1719 AGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGACCATCT 1778
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||| || || |||||||| || || || ||||| || | || || |||||
Sbjct 1779 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 1838
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || ||| || ||||| || || |||||| ||| || || || || || |||
Sbjct 1839 TGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGTC 1898
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || || ||||| | ||||||
Sbjct 1899 TTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || || || || ||||| || |||||||| | | || | ||||||||||| ||
Sbjct 2184 TGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCTTCCAGTTGT 2243
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || || ||||| | ||||| || || |||| || || ||||| |||||||||
Sbjct 2244 TTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTT 2303
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||||| |||||||| ||||| || || ||||| | |||||| || ||||| ||
Sbjct 2304 GCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATGGTTTTTCCTGTA 2363
Query 211092 AGAGTCTTTACAAACACCTGCATT 211115
|||||||| ||||| | |||||||
Sbjct 2364 AGAGTCTTAACAAAGATCTGCATT 2387
>seq27512
Length=242
Score = 143 bits (158), Expect = 6e-29
Identities = 151/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||| || ||||| || || || || || | || || | |||||| || |||||||| ||
Sbjct 30 AGTAGATTCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATCCTCAAGCTGCTTTCC 89
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|| || ||||| | ||||||||| ||||||| |||||||| || || || ||| ||
Sbjct 90 AGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTTGAATTTTTGCCTT 149
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
|| |||||||| ||||||||| ||||| || || ||||| ||||| || || || ||
Sbjct 150 AACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGT 209
Query 211097 CTTTACAAACACCTGCATT 211115
||||||||| | ||||||
Sbjct 210 CTTTACAAATATTTGCATT 228
>seq27511
Length=800
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| | ||| || || || || || |||||||| | | || | |||||||
Sbjct 428 AGCACCAAGTGCAAAGTAGATTCCTTCTGAATATTATAATCTGACAATGTACGTCCATCT 369
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||| || ||||| || ||||| | |||||||||||||||| ||||| |||||
Sbjct 368 TCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTGTCT 309
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| |||||| || || ||||| || || ||||| ||| || || | |||||| ||
Sbjct 308 TGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTT 249
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || || ||||||||||| | ||||||
Sbjct 248 TTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 216
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| | ||| || || || || || || || || | || || | |||||||
Sbjct 656 AGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCT 597
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || || ||||| | ||| || || || |||| || || || |||
Sbjct 596 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATACCCTCTTTATCC 537
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || || || || ||||| || || ||||| ||| || || | |||||| |||
Sbjct 536 TGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTC 477
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
|| || || || ||||||||||| | ||||||
Sbjct 476 TTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 444
>seq76306
Length=316
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | ||| || || || ||||| ||||| || | | || | ||||||||||| ||
Sbjct 260 GTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTG 201
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || ||||| || || | |||||| || ||||||| ||||||||||| || |||||
Sbjct 200 CTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTT 141
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
| || ||||||||||| || ||||| ||| || || | ||||| || || || ||
Sbjct 140 TGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGT 81
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| ||| ||||| || | |||||
Sbjct 80 TAAAGTTTTTACGAAGATTTGCAT 57
>seq185851
Length=438
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| || ||||| ||||||||||| || || ||||||||
Sbjct 438 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGG 379
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||||| ||||| | || || ||||| | ||||||
Sbjct 378 GTGATCGTCTTACCCGTCAATGTTTTGACAAAGATCTGCAT 338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1155036864419295
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